Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g01323 | TCAACAATGACTGTGACGCCGAGGATCTCCATCAACGACGGGAACCTGGTGGTTCACGGAAAGACCATATTGACTGGAATCCCAGACAACATTGTGTTGACACCAGCATCCGGTCTGGGACTCGTCGCTGGTGCATTTATTGGTGCTACGGCTTCCCATACCAAAAGCCTTCATGTCTTTCCCGTGGGTGTCCTTGAGGACCTTCGATTCATGTGTTGTTTCCGATTTAAATTATGGTGGATGACTCAGAGGATGGGAAATTGTGGAAAAGAAATTCCATTGGAGACCCAATTTCTGCTCGTGGAGAGCAAAGACAACAATGAAGGAGGAAATCATGATGTCTCCCCAACAATATACACTATTTTCCTTCCTTTACTTGAAGGCCAATTCCGTGCTGTCCTTCAAGGGAATGACAAAAATGAGGTCGAGATCTGCCTGGAGAGCGGCGATAATTCTATTGAGACGAATCAAGGTCTTAACCTAGTTTACGTGCACGCTGGGACAAATCCGTTTGAAGTTACTAGTCAAGCTGTAAAGGCTGTAGAAAAGCACACCCAAGCTTTTCATCATCGCGAGAGGAAAAAGTTGCCTTCTTTCCTTGACTGGTTTGGTTGGTGCACATGGGATGCGTTTTACACTGATGTCACAGCTGAAGGAATTGAAGAAGGCCTCAAAAGCTTGTCAGAAGGAGGAACTCCTCCTAGATTCTTAATCATAGATGATGGTTGGCAACAGATAGAGAGCAAAGGAAAGGATGCTGATTGCGAGGTTCAAGAAGGAGCACAATTTGCTAGTAGATTGACAGGAATAAAAGAGAACGGAAAATTCCAAAAGAATGGACAGAATGACGGACATGTCTCTGGACTGAAGCATGTTGTGGATGGAGCCAAGCAACATTACAATGTGAAGAATGTGTATGTGTGGCATGCTCTAGCGGGATATTGGGGTGGAGTAAAGCCATTAGCTGCAGGCATGGAACATTACGACTCTGCTTTGGCATATCCGGTTCAGTCCCCCGGTGTTCTGGGTAATCAACCGGACATTGTCATGGATAGTCTAGCTGTTCATGGCCTGGGTCTTGTGCATCCAAAGAAAATATTCAACTTCTACAATGAACTTCATTCCTACTTAGCTTCATGTGGAGTAGATGGAGTAAAAGTTGATGTGCAGAACATTATCGAAACCCTTGGGGTTGGTCATGGTGGCAGAGTATCTCTGACTCGCAGCTACCATCAGGCACTCGAAGCCTCGATTTCTCGTAACTTTCCTGACAATGGATGTATTGCCTGCATGTGTCACAACACCGATGGACTCTACAGTGCTAAACAGACGGCTGTGGTCAGGGCTTCGGATGACTTCTATCCTCGGGATCCCACGTCGCACACCATTCATATTTCATCTGTGGCGTTCAATACTCTCTTTCTTGGAGAATTCATGCAACCCGACTGGGATATGTTTCAGAGCCTACATCCTGCTGCTGAGTATCACGGTGCAGCTCGAGCAATTGGTGGATGCGCAATCTATGTCAGTGACAAGCCAGGAAACCACAACTTTGAACTATTAAAGAAGCTGGTTCTCCCTGATGGATCTGTTCTCCGTGCTCAACTGCCTGGAAGACCAACTCGTGATTCACTATTCTCTGATCCTGCTAGAGATGGAACAAGCTTGCTCAAAATTTGGAATATGAACAAGTGCTCTGGTGTGGTTGGGGTGTTCAACTGCCAAGGCGCTGGTTGGTGTAAGATCACCAAGAAGACCCGCATTCACGATGAATCTCCCGGTACTCTTACCTGTTCTGTCTATGCTAACGATGTCGAGAACATTGCTCAAATTGCCGGTCCAGATTGGAACGGGGAGACTGCAGTCTATGCCTACAAATCCAGAGAGTTGATCCGGCTACCAAAAGTAGTTTCTTTGCCTGTTACACTCAAGGTCCTTGAATACGAACTTTTCCATTTCTGTCCAATCAGAGAAATCACCTCCTACATTTCAATTGCACCAATAGGTCTACTTGACATGTTCAATGCCGGTGGTGCTGTGGATCAAGTCGAGATCAACCCCATATCAGAATCTGACCAGCGACCCGAGCTCTTCGACGGTGAAATTCAATCTGAGCTGACCACTTCACTGAGCAAAAACCGATCCCCGACTGCAACAATCACCTTCAAAGTCAGAGGCTGCGGCCGATTTGGCGCATACTCGTCTCAAATTCCGCTCAAGTGCAAGGTTGACAATACCGCCACCGACTTCGACTATGATGCCACAACTGGACTCACTACATTTACCAGTTGGCTTGATCTCTTCGATTTCTTCTTAGTTTTGTGCTGGATGTCTTTTTTTTTTTTTTCCCTCCTTCAGGCAAAAGCATCAAAGCAGATCGTCGGACGTCAAGTTTGCCAAATCTGCAGCGACTCTGTTGGAAAAACTGTTGATGGGGAGCCGTTTGTTGCGTGCAATGTTTGTAATTTTCCTGTTTGTAGACCCTGCTATGAGTATGAAAGAAAGGATGGAAATAAGTCCTGTCCTCAATGCAAGACTAAATACAAGTGGCTTAAAGGAAGCCCTCTGGTTAATGGGGAAGAAGGAGATGATTCTGATGTTAATGGAGGGGCGAATGCTCCCAATTACAATTCTAGTGAAGGAGATATGAAGTATAAGCTACCTGAACGTACGCTTAGTTGGGATACAAACTATGATAAGGAAGAATCCTTCAATCATATTCCATTGCTCACCACTGGACGCTCTGTTTCTGGAGACCTATCAGCTGCATCCCCTGAACGCCTTTCAATGGCGTCTCCAGAAAGCTTGAGCAGGATGTATGTCATCCCCTTATCATGTCACTTTCATTTCGGTAGAATTATCTTTCTGGGTCTTTTTAAATTGGAGTTTACTTTTCTTTTCTTCTTTCTTTTGGCTAAATATTGGAAATATTTGTTGATATTGGCAGCTAATTATAGAATAGTGGACCCTTCGAGAGAGGCTGGGTCGAATGGACTTGGCGGTGTTGCCTGGAAAGAGAGAATTGATGGTTGGAAGATGAAGCAGGAGAAGAGTCATGCTCCAATGAGTAGCCATGCTCCCTCTGAAGGTAGAGGAGGCGCAGACTTTGATGCTAGTACTGATATTGTTATGGATGATTCTTTGCTAAATGATGAAGCGCGCCAGCCTTTATCAAGGAAGGTTTCGGTTCCATCCTCCAGGATCAATCCTTACAGGATGGTTATAGTTCTACGTCTTGTTATTCTTTCCATCTTCCTCCATTACCGTTTGACAAACCCGGTTCCCAATGCATTTACTTTGTGGTTAATATCTGTCATTTGTGAGATATGGTTTGCATTTTCATGGATTTTGGATCAATTCCCCAAGTGGCTCCCTGTGAACCGTGAGACGTATCTTGATAGGCTAGCACTGAGATATGATAGAGAAGGAGAGCCTTCTCAGTTGGCGGCTGTAGACATTTTTGTGAGTACGGTTGACCCTCTAAAGGAACCTCCTCTTGTCACGGCCAACACTGTTTTGTCTATTCTGGCAGTGGATTACCCAGTCGACAAAGTTTCTTGCTATGTCTCAGACGATGGAGCTGCTATGTTGACATTTGAAGCTTTGTCTGAAACATCTGAATTTGCGAGAATATGGGTTCCTTTCTGCAAAAAATATAGCATTGAGCCAAGAGCTCCAGAGTGGTATTTTTCAAAGAAGATTGACTATTTGAAAGATAAGGTTCAACCATCATTTGCCAAAGATCGAAGGGCGATGAAGAGAGAGTACGAAGAGTTTAAAATAAGAATCAATGTACTTGTTGCAAAGGCGCAAAAGATTCCTGATGAAGGGTGGATCATGCAAGATGGAACCCCTTGGCCTGGAAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGACATAGTGGAGGTCTCGACAGTGAGGGTAATGAGCTACCCCGTCTAGTTTATGTATCTCGTGAGAAGCGGCCTGGATTTCAGCACCACAAGAAGGCTGGTGCCATGAATGCACTTGTTCGTGTGTCGGCTGTGCTTACAAATGGACCCTTCTTATTAAATCTCGATTGTGATCATTACATAAACAACAGCAAGGCATTGAGGGAAGCTATGTGTTTTCTAATGGATCCAAATCTTGGCAAGTCTGTTTGTTATGTTCAATTTCCTCAGAGATTTGATGGAATTGATAAAAACGATCGATATGCAAATCGAAACACAGTGTTCTTTGATATCAATTTAAGGGGCTTGGACGGCATCCAAGGTCCAGTTTACGTCGGAACGGGATGTGTTTTCAATCGAACTGCCTTGTATGGTTACGAGCCACCTGTCAAGTCTAAGCATAAGAAACGAGGACTATTCTCTTTTGGTGGGAAAAAGAGTTCGAAATCAAGTAGGAAGGGCTCTGACGGTAAAAAATCTAGCAAGCATGCTGACCCCACCGTCCCAATATTTAACCTAGAGGATATTGAGGAAGGAGTTGAAGGTTCTGGGTTTGATGATGAGAAGTCACTGCTCATGTCACAGATGAGCCTGGAGAAGAGGTTTGGTCAATCAGCCGTTTTTGTTGCTTCGACATTGATGGAGAATGGTGGGGTTCCACAGTCAGCCATTGCTGAATCCCTCCTCAAAGAAGCTATTCACGTCATTAGTTGTGGATATGAAGACAAGACAGAGTGGGGAACTGAGATAGGATGGATCTATGGCTCTGTTACAGAGGATATTCTTACGGGTTTTAAGATGCATGCTCGTGGATGGAGATCGATCTACTGCGTGCCAAAGCTTGCAGCATTTAAAGGATCAGCTCCGATAAATCTTTCCGACCGTCTAAATCAAGTGCTGCGATGGGCTTTAGGTTCAGTTGAAATTCTTTTCAGTCGTCACTGTCCTATATGGTATGGCTATGGAGGAAGGCTCAAATGGCTTGAGAGATTTGCTTACATTAATACCACCATTTACCCATTAACATCCATCCCTCTTCTTGCCTACTGCACATTGCCGGCCATATGTCTGCTCACTGGCCAGTTCATCATTCCACAGATTAGTAACATTGCCAGTATCTGGTTCATATCTCTCTTTCTTTCCATCTTCGCCACCGGAATATTGGAAATGAGATGGAGTGGCGTTGGTATCGACGAATGGTGGAGAAACGAACAATTCTGGGTTATTGGTGGTGTGTCGGCCCATCTCTTCGCCGTTTTCCAAGGCCTGCTCAAAGTCCTTGCCGGAATCGACACAAATTTCACTGTCACCTCCAAAGCTTCCGATGAGGATGGCGATTTTGCAGAGCTCTACTTGTTCAAATGGACAACTCTCCTCATCCCTCCGACAACTCTCCTCATCATCAACTTAGTCGGAGTAGTTGCGGGAGTCTCTTACGCCGTTAACAGTGGCTACCAACAAAGTTTCAAGCTTCCTTACGTTTCTACCGGAAAAGGTGGCTCGAAGACCGGGAGTTTCAAGTTCAAAGCCACTTCGGCTCAAACAAAGATAACATTTTTCAGTCCATACTATCACACAAAGCGCAAAGACTTCGGCCATTTGTGTGGCCCTGTTTTGGATAATATTGTGGTTTTTCCATTGCCTTAG | 5592 | 44.87 | STMTVTPRISINDGNLVVHGKTILTGIPDNIVLTPASGLGLVAGAFIGATASHTKSLHVFPVGVLEDLRFMCCFRFKLWWMTQRMGNCGKEIPLETQFLLVESKDNNEGGNHDVSPTIYTIFLPLLEGQFRAVLQGNDKNEVEICLESGDNSIETNQGLNLVYVHAGTNPFEVTSQAVKAVEKHTQAFHHRERKKLPSFLDWFGWCTWDAFYTDVTAEGIEEGLKSLSEGGTPPRFLIIDDGWQQIESKGKDADCEVQEGAQFASRLTGIKENGKFQKNGQNDGHVSGLKHVVDGAKQHYNVKNVYVWHALAGYWGGVKPLAAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKIFNFYNELHSYLASCGVDGVKVDVQNIIETLGVGHGGRVSLTRSYHQALEASISRNFPDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPTSHTIHISSVAFNTLFLGEFMQPDWDMFQSLHPAAEYHGAARAIGGCAIYVSDKPGNHNFELLKKLVLPDGSVLRAQLPGRPTRDSLFSDPARDGTSLLKIWNMNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTCSVYANDVENIAQIAGPDWNGETAVYAYKSRELIRLPKVVSLPVTLKVLEYELFHFCPIREITSYISIAPIGLLDMFNAGGAVDQVEINPISESDQRPELFDGEIQSELTTSLSKNRSPTATITFKVRGCGRFGAYSSQIPLKCKVDNTATDFDYDATTGLTTFTSWLDLFDFFLVLCWMSFFFFSLLQAKASKQIVGRQVCQICSDSVGKTVDGEPFVACNVCNFPVCRPCYEYERKDGNKSCPQCKTKYKWLKGSPLVNGEEGDDSDVNGGANAPNYNSSEGDMKYKLPERTLSWDTNYDKEESFNHIPLLTTGRSVSGDLSAASPERLSMASPESLSRMYVIPLSCHFHFGRIIFLGLFKLEFTFLFFFLLAKYWKYLLILAANYRIVDPSREAGSNGLGGVAWKERIDGWKMKQEKSHAPMSSHAPSEGRGGADFDASTDIVMDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLVILSIFLHYRLTNPVPNAFTLWLISVICEIWFAFSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARIWVPFCKKYSIEPRAPEWYFSKKIDYLKDKVQPSFAKDRRAMKREYEEFKIRINVLVAKAQKIPDEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDSEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKSKHKKRGLFSFGGKKSSKSSRKGSDGKKSSKHADPTVPIFNLEDIEEGVEGSGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSAIAESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCVPKLAAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYINTTIYPLTSIPLLAYCTLPAICLLTGQFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINLVGVVAGVSYAVNSGYQQSFKLPYVSTGKGGSKTGSFKFKATSAQTKITFFSPYYHTKRKDFGHLCGPVLDNIVVFPLP | 1863 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 52786012 | 52802020 | + | Bma022514.1 | Bma05g01323 | 83407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g01323 | 1863 | Pfam | Cellulose synthase | 1151 | 1804 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Bma05g01323 | 1863 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 1165 | 1671 | IPR029044 | - | |
Bma05g01323 | 1863 | MobiDBLite | consensus disorder prediction | 1464 | 1478 | - | - | |
Bma05g01323 | 1863 | MobiDBLite | consensus disorder prediction | 1446 | 1481 | - | - | |
Bma05g01323 | 1863 | Gene3D | Aldolase class I | 201 | 512 | IPR013785 | - | |
Bma05g01323 | 1863 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 785 | 873 | IPR013083 | - | |
Bma05g01323 | 1863 | CDD | mRING-HC-C4C4_CesA_plant | 797 | 847 | - | - | |
Bma05g01323 | 1863 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1268 | 1442 | IPR029044 | - | |
Bma05g01323 | 1863 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 790 | 1802 | - | - | |
Bma05g01323 | 1863 | ProSiteProfiles | Zinc finger RING-type profile. | 799 | 845 | IPR001841 | - | |
Bma05g01323 | 1863 | PANTHER | CELLULOSE SYNTHASE | 790 | 1802 | - | - | |
Bma05g01323 | 1863 | Pfam | Raffinose synthase or seed imbibition protein Sip1 | 9 | 761 | IPR008811 | - | |
Bma05g01323 | 1863 | SUPERFAMILY | (Trans)glycosidases | 199 | 529 | IPR017853 | - | |
Bma05g01323 | 1863 | SUPERFAMILY | RING/U-box | 793 | 865 | - | - | |
Bma05g01323 | 1863 | Pfam | Zinc-binding RING-finger | 794 | 865 | IPR027934 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02157 | Bma-Chr1:78243339 | Bma05g01323 | Bma-Chr5:52786012 | 8.66E-12 | dispersed | |
Bma04g00063 | Bma-Chr4:561763 | Bma05g01323 | Bma-Chr5:52786012 | 0 | dispersed | |
Bma05g01323 | Bma-Chr5:52786012 | Bma06g00533 | Bma-Chr6:27321590 | 8.71E-24 | dispersed | |
Bma15g00485 | Bma-Chr15:5654506 | Bma05g01323 | Bma-Chr5:52786012 | 1.92E-54 | dispersed | |
Bma05g01323 | Bma-Chr5:52786012 | Bma06g00955 | Bma-Chr6:45847014 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g01323 | K10999 | - | csv:101211779 | 1734.92 |