Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01414 ATGACGGTTACATCCACATCTCGCGAAGAGAATGTTTACTTAGCTAAGCTCGCGGAGCAAGCTGAGCGATACGATGAGATGGTGGAGTTTATGGAGAAGGTTTCCACAGCTGGAGAGAGCGACGAACTCACCGTCGAGGAGCGGAATCTCCTCTCCGTGGCTTATAAGAACGTGATCGGAGCTCGAAGAGCGTCGTGGCGCATTGTCTCGTCCATCGAGCAGAAGGAAGAAAGTCGGGGTAACGACAAACATGTTTCCATCATACGCGATTACAGATCCAAGATTGAGAACGAGCTGTCCGAAATCTGCGATGGGATCCTCAAGCTCCTTGACTCCCGCCTTATTCCGTCCGCTTCAGCTGGAGATTCCAAGGTCTTTTTCTTAAAAATGAAGGGCGATTATAACAGGTACCTTGCGGAATTCAAGACCGGAGCTCAGCGGAAGGAGGTTGCTGAGAGTACCCTCACTGCTTACAAAGCTGCTCAGATTTCCAGCTCATATGAATTGCACCTTAAGAACAAATACATTATCAAATGTTATTCATTCAACGTAGTTCTTCATTTGCAGGATATTTCTAACTCAGAATTAGCTCCAACTCATCCTATCCGACTTGGACTGGCTCTGAATTTCTCCGTGTTTTACTATGAGATTCTAAACTCTCCAGATCGTGCTTGCAGTCTTGCTAAACAGGCTTTTGATGAAGCAATTGCTGAATTGGATTCACTGGGTGAGGAATCATACAAGGATAGCACTCTAATCATGCAGCTTCTTCGTGATAACCTCACTATATGGACTTCTGACATGCAG 807 45.97 MTVTSTSREENVYLAKLAEQAERYDEMVEFMEKVSTAGESDELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNDKHVSIIRDYRSKIENELSEICDGILKLLDSRLIPSASAGDSKVFFLKMKGDYNRYLAEFKTGAQRKEVAESTLTAYKAAQISSSYELHLKNKYIIKCYSFNVVLHLQDISNSELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTIWTSDMQ 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53506669 53507883 + Bma031260 Bma05g01414 83498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01414 269 Gene3D - 1 269 IPR036815 -
Bma05g01414 269 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Bma05g01414 269 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Bma05g01414 269 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Bma05g01414 269 SUPERFAMILY 14-3-3 protein 7 267 IPR036815 -
Bma05g01414 269 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Bma05g01414 269 Coils Coil 14 34 - -
Bma05g01414 269 PIRSF 14-3-3 178 269 IPR000308 -
Bma05g01414 269 PIRSF 14-3-3 2 177 IPR000308 -
Bma05g01414 269 PANTHER 14-3-3 PROTEIN 188 268 IPR000308 -
Bma05g01414 269 PANTHER 14-3-3 PROTEIN 4 169 IPR000308 -
Bma05g01414 269 SMART 1433_4 8 269 IPR023410 -
Bma05g01414 269 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 188 268 - -
Bma05g01414 269 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 4 169 - -
Bma05g01414 269 Pfam 14-3-3 protein 14 170 IPR023410 -
Bma05g01414 269 Pfam 14-3-3 protein 190 265 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00132 Bma-Chr2:1219654 Bma05g01414 Bma-Chr5:53506669 4.76E-155 dispersed
Bma02g00465 Bma-Chr2:7344096 Bma05g01414 Bma-Chr5:53506669 4.23E-142 dispersed
Bma05g01414 Bma-Chr5:53506669 Bma14g01097 Bma-Chr14:13688336 2.93E-139 dispersed
Bma05g01414 Bma-Chr5:53506669 Bma01g01396 Bma-Chr1:22059947 4.16E-155 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01414 K06630 - csin:114283877 416.001