Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00008 TGTAGTAGAAGATTCGAAAGTATGGCTGGTGGTAGAAGGAAAAAGCAACATATTAGAAGAATCCATGCTTTTCATTGCGGAAAAGCATCCTTCAAAATCGATCACTCTCTCATCGGAGGGCCGGGATTTTCGAGGGTCGTATATGTCAATGATCCCGATTGTTTGGATGCTACTCTTCTCAACTATGGAGGGAATTATGTCAAAACGACAAAATATACACTCGCCACGTTCTTCCCCAAATCGTTGTTCGAGCAATTTAGACGCGTTGCCAATATATATTTCCTCATTAATGCATTGCTTTCTTTCACACCGCTCTCGCCTTACTCGGCGGTTAGTAATGTTCTTCCTCTGGTTGTCGTGATTGGTGTTACGATGGCGAAAGAGGCTATCGAAGATTGGAGGAGGCAAAAGCAGGATATTGAGATGAACAACAGGAAGGTGAAGGTGAACTTCGGAGACGGCGTCTTCAATGACGTAAAATGGATGGATTTGAGAGTTGGAGATGTTGTTAGAGTAGAAAAAGATGAGTTTTTCCCTGCCGATCTAATCTTACTCTCGTCGAGTTACGAGGAAGCGATTTGTTACGTGGAGACGACCAATCTCGACGGAGAAACGAATTTGAAGCTAAAACAAGCTCTCGAATTGACTGCAAACTTCCACGAAGATTCAAGCTTCCAAGATTTCAAGGCCGTAATAAAATGCGAAGATCCAAACGCAAATCTATACTCGTTCGTGGGCAGTTTGATGCTCGAAGAACAGCAGTACCCTCTCAATCCTCAGCAGCTTCTTCTCCGAGACTCAAAGCTGAGAAACACTGATTTCATTTATGGAGTTGTGATATTTACAGGTCATGATACGAAAGTTATTCAGAATTCAACTGCTCCTCCTTCAAAGAGAAGCACCATTGAGCGAAGGATGGATAAAATAGTCTACTTCTTGTTCTTTGTTCTGGTTTTGATATCTTTTATCGGGTCGATTTTCTTTGGTATATCGACTAGAGAGGACATAGAAAATGGACGTATGAAAAGATGGTATCTCAGACCGGACGATACGACGATATTTTACAGCCCGACAAAAGCTCCAGTTGCGGCAATTTTGCAATTTTTGACTGCCTTGATGTTGTACAGCTATTTGATCCCGATTTCCTTGTATGTGTCGATAGAAATCGTCAAAGTTCTTCAGAGTGTGTTCATCAACTACGATGAATTAATGTACCATGCAGAGACCAATAAGCCAGCCCGGGCTCGAACGTCGAATTTGAACGAAGAGCTTGGGCAAGTGGAAACTATACTTTCTGATAAAACAGGAACTTTGACTTGTAATTCGATGGAGTTCATCAAGTGTTCGATTGCCGGAACTGCATATGGCCGAGGAACTACGGAAGTTGAGAGAGCTCTCGCGAGGAGAAAAGGGTCGTCTTTGCCTCGGGACGAGACAGTCGAAGAAGGAAGTGGTGAAGAATTGATCGAAGGAAAGTCGGAGGTGAAGGGATTTAATTTTAACGATGAAAGAATAACAAACGGAAAGTGGATCAACGAGCCTCGAGCCGATATAATCCAGAAGTTTCTTCAGCTTTTGGCGATTTGCCACACTGCCATACCTGAAGTTGATCCGGAAACCGGAAGAATTTCATACGAGGCCGAATCCCCCGATGAGGCTGCATTTGTGATTGCAGCTAGAGAACTCGGCTTTGAATTCTACGGACGGACTCAAACAACGATCTCTGTTCTTGAGATCGATCCTTCAACCAATACGAAATTCGAAAGATCCTACCAACTTTTGGATATCTTAGAATTCAGCAGCTCAAGAAAAAGAATGTCTGTGATTGTTAGAAACTCGGAGGGAAAACTATTACTACTTTGTAAAGGAGCTGACAGTGTTATGTTTGAAAGACTTGCGAAGAATGGAAGGGAGTTTGAAGAGGAGACAAAGAGCCACATTAATGAGTATGCTGATGCTGGTTTGAGAACTCTGGTATTAGCATATCGTGAGCTTGACGAGGACGCATACAGAACTTTTCACGAGGAATTGACAAACGCGAAAAACTCGGTTAGTGCGGATCGAGAGGAAATGCTCGAGCAAATGTCAGAAACAATAGAGAAAGATCTCATTCTTCTAGGCGCTACTGCAGTCGAAGACAAGCTTCAAAATGGGGTACCGGAATGCATCGACAAACTTGCACAGGCAGGAATCAAGATATGGGTTTTGACTGGAGATAAAATGGAGACTGCTATCAATATTGGGTTTGCTTGCAGTTTACTTAGGCAAGGGATGAAACAAATTATAATCAACTCCGAGACTCCCGAAGCTAAATCATTGGAGAAGATTGGGGATAATGCTGCTGCTGCCGAGGCTGTTAAGGCGAGTGTTATAGAGCAATTAAGAAATGCAAAGGCCTTGCTTACTACTGCTAAAATTTTGGGGGCGATGGCTTTGATCATTGATGGGAAGTCGCTAGCCTATGCTTTGGAGGAGGATGTTAAGGACCTATTTTTAGATCTCGCCATTGGCTGTTCGTCCGTCATTTGTTGCCGTTCTTCTCCCAAACAGAAAGCTCTCGTTACACGACTTGTCAAGCGAAGAACACGACACACCACCCTGGCGATCGGTGATGGAGCAAACGATGTTGGCATGCTTCAAGAGGCTGATATTGGTGTCGGTATTAGTGGTGTTGAAGGAATGCAGTTATTCCTGTGTTTTCAGGCAGTCATGTCGAGTGATATTGCAATTGCACAGTTTAGGTTTCTGGAGAGACTGCTGCTTGTGCATGGGCACTGGTGCTATCGAAGGATCTCGTCAATGATTTGCTATTTTTTCTACAAGAACATTGTTTTCGGCTTCACTCTCTTCTTCTTTGGGATTTACGCGTCCTTTTCCGGCCAATCTGCTTACAATGACTGGTTTCTGTCTCTGTACAATGTCTTCTTCACGTCCCTCCCGGTAATCGCGTTGGGAGTTCTTGACCAAGATGTATCCGCCCGTTTCTGTCTCAAGTTTCCTTTGTTATACCAAGAAGGTGTCCAAAATGTCTTGTTCAGCTGGATTCGAATTCTTGGGTGGGCCTTCAATGGAGTCCTAAGTGCAGTAATTATCTTCTTCTCCTGCATTTATGCGATGGAACGTCAAGCTTTCCGGCACGGAGGTGAAGTTGTCGGGCTGGAAATCTTGGGCGCGATGATGTACACGTGCGTCGTATGGGTCGTGAATTGTCAAATGGCTCTTTCGATCAATTACTTCACGTATATTCAACACATTTTGATCTGGGGAAGCATTATTTTCTGGTACATATTTCTCATGATATATGGAGCTATGAACCCGAATTTATCGACCACTGCCTATCAAGTCTTCATCGAAGCCTGTGCTCCGGCCCCATTTTACTGGATCATCACGCTTCTTGTCACAGTCGCCACACTCCTTCCATACTTCACATATTCAACTATCCAAATCCGGTTTTTCCCGCTTTATCATCAGATGATTCACTGGATAAGATCAGACGGGCAATTGGACGATCCGGAATACTGTCAAGTGGTTCGACAACGTTCCATACGACCCACCACCGTAGGTTTCACTGCTAGATTCGAAGCATCGAAACGATTTGAAGAAAAGTACGAGATCGTTTCATGA 3624 43.79 CSRRFESMAGGRRKKQHIRRIHAFHCGKASFKIDHSLIGGPGFSRVVYVNDPDCLDATLLNYGGNYVKTTKYTLATFFPKSLFEQFRRVANIYFLINALLSFTPLSPYSAVSNVLPLVVVIGVTMAKEAIEDWRRQKQDIEMNNRKVKVNFGDGVFNDVKWMDLRVGDVVRVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALELTANFHEDSSFQDFKAVIKCEDPNANLYSFVGSLMLEEQQYPLNPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVIQNSTAPPSKRSTIERRMDKIVYFLFFVLVLISFIGSIFFGISTREDIENGRMKRWYLRPDDTTIFYSPTKAPVAAILQFLTALMLYSYLIPISLYVSIEIVKVLQSVFINYDELMYHAETNKPARARTSNLNEELGQVETILSDKTGTLTCNSMEFIKCSIAGTAYGRGTTEVERALARRKGSSLPRDETVEEGSGEELIEGKSEVKGFNFNDERITNGKWINEPRADIIQKFLQLLAICHTAIPEVDPETGRISYEAESPDEAAFVIAARELGFEFYGRTQTTISVLEIDPSTNTKFERSYQLLDILEFSSSRKRMSVIVRNSEGKLLLLCKGADSVMFERLAKNGREFEEETKSHINEYADAGLRTLVLAYRELDEDAYRTFHEELTNAKNSVSADREEMLEQMSETIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIINSETPEAKSLEKIGDNAAAAEAVKASVIEQLRNAKALLTTAKILGAMALIIDGKSLAYALEEDVKDLFLDLAIGCSSVICCRSSPKQKALVTRLVKRRTRHTTLAIGDGANDVGMLQEADIGVGISGVEGMQLFLCFQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTLFFFGIYASFSGQSAYNDWFLSLYNVFFTSLPVIALGVLDQDVSARFCLKFPLLYQEGVQNVLFSWIRILGWAFNGVLSAVIIFFSCIYAMERQAFRHGGEVVGLEILGAMMYTCVVWVVNCQMALSINYFTYIQHILIWGSIIFWYIFLMIYGAMNPNLSTTAYQVFIEACAPAPFYWIITLLVTVATLLPYFTYSTIQIRFFPLYHQMIHWIRSDGQLDDPEYCQVVRQRSIRPTTVGFTARFEASKRFEEKYEIVS 1207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 229499 234336 + Bma022609.1 Bma06g00008 83510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00008 1207 ProSitePatterns E1-E2 ATPases phosphorylation site. 433 439 IPR018303 -
Bma06g00008 1207 PRINTS P-type cation-transporting ATPase superfamily signature 431 445 - -
Bma06g00008 1207 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Bma06g00008 1207 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 8 1200 - -
Bma06g00008 1207 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 62 1159 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bma06g00008 1207 SUPERFAMILY Calcium ATPase, transduction domain A 151 290 IPR008250 -
Bma06g00008 1207 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 505 708 IPR023299 GO:0000166
Bma06g00008 1207 SUPERFAMILY HAD-like 419 919 IPR036412 -
Bma06g00008 1207 SFLD Haloacid Dehalogenase 415 926 - -
Bma06g00008 1207 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 835 957 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00008 1207 Coils Coil 123 150 - -
Bma06g00008 1207 Gene3D - 710 919 IPR023214 -
Bma06g00008 1207 CDD P-type_ATPase_APLT_Dnf-like 64 1033 - -
Bma06g00008 1207 Pfam Phospholipid-translocating ATPase N-terminal 47 112 IPR032631 -
Bma06g00008 1207 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 8 1200 - -
Bma06g00008 1207 Pfam E1-E2 ATPase 142 363 - -
Bma06g00008 1207 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 1153 IPR023298 -
Bma06g00008 1207 SFLD p-type atpase 415 926 IPR044492 -
Bma06g00008 1207 Pfam Phospholipid-translocating P-type ATPase C-terminal 903 1153 IPR032630 -
Bma06g00008 1207 Coils Coil 674 694 - -
Bma06g00008 1207 Pfam Cation transport ATPase (P-type) 546 632 - -
Bma06g00008 1207 Gene3D - 479 709 IPR023299 GO:0000166
Bma06g00008 1207 Gene3D - 112 293 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00745 Bma-Chr3:6757998 Bma06g00008 Bma-Chr6:229499 2.13E-166 dispersed
Bma06g00008 Bma-Chr6:229499 Bma14g01647 Bma-Chr14:34856873 0 dispersed
Bma06g00008 Bma-Chr6:229499 Bma14g01685 Bma-Chr14:35901088 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00008 K01530 K14802 pop:7490079 1918.66