Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00049 ATGTTGGTGTTCATCTATTTTCATACACTGAACTTGAAGCAGCTACCAACAAATTTGATTCCGCTAAAGAACTCGGTGATGGAGGCTTCGGTACCGTATATTATGCTTCAGGATGGGCGAGCTGTAGCAGTCAAGCGTTTGTATGAAAATAATTGCAAGAGAGTTGAGCAGTTCAGGAATGAAGTAGAAATTCTCACTCGCCTACGCCATAAGAATCTTGTTTCTTTATACGGGTGTACATCTCGACAGTGTCGTGAACTCGTGCTCGTTTATGAATACATCTCCAATGGCACAGTGGCCGACCATCTTCACGGCGAAAGAGCGAAACCAGGTGAGCTTCCATGGTCCACTCGGATGAAAATTGCCATAGAAACTGCAAGTGCATTGGTCTATCTCCATGCTTCCGATGTCATTCATCGTGACGTTAAAACGAGCAATATTCTCCTCGACAACAATTACAATGTTAAAGTTGCAGATTTTGGACTATCTCGTCCTTTCCCAACCGATGTTTCGCATATTTCAACTGCTCCACAAGGAACTCCTGGCTATCTTGATCCCGAGTACAACCAATGTTACCGGTTAACGGAAAAGAGTGATGTTTACAGCTTCGGAGTCGTCTTAGTGGAACTTATATCGTCCAAGCCTGCCGTAGATATCACAAGGCATCGACACGAGATTAAGTTATCGACCATGGCTATTAATAAGATCCAGAATAGTGCATTAAACGAGTTTGTTGATCCTCATCTCGGGTTTGAAACAGATGAAAGAGTAAGAAAAATGATCAGTGCTGTGGCAGAGTTGGCATTTCAGTGTTTGCAGAGTGTGAAGGACACAAGGCCATCCATGGCTGATATTCTTCAGACTTTGAATCGCATAGAGAATGAAGATAGCTCGAAAGAAAAAGCAGGGGATATTAATGTCGCCGCAAGCAAAGAATTGCCCAAGGACATTTACGTGAATTCTTCACCCAATTCCGTTATGGTTCGATGGCTTAGCATGTCTACGACACCAAATGTCAGCAGTTAA 1026 43.18 MLVFIYFHTLNLKQLPTNLIPLKNSVMEASVPYIMLQDGRAVAVKRLYENNCKRVEQFRNEVEILTRLRHKNLVSLYGCTSRQCRELVLVYEYISNGTVADHLHGERAKPGELPWSTRMKIAIETASALVYLHASDVIHRDVKTSNILLDNNYNVKVADFGLSRPFPTDVSHISTAPQGTPGYLDPEYNQCYRLTEKSDVYSFGVVLVELISSKPAVDITRHRHEIKLSTMAINKIQNSALNEFVDPHLGFETDERVRKMISAVAELAFQCLQSVKDTRPSMADILQTLNRIENEDSSKEKAGDINVAASKELPKDIYVNSSPNSVMVRWLSMSTTPNVSS 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 825598 826860 - Bma022659.1 Bma06g00049 83551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00049 341 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 33 331 IPR044652 -
Bma06g00049 341 ProSiteProfiles Protein kinase domain profile. 1 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00049 341 Gene3D Transferase(Phosphotransferase) domain 1 95 314 - -
Bma06g00049 341 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 33 331 - -
Bma06g00049 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Bma06g00049 341 Gene3D Phosphorylase Kinase; domain 1 29 94 - -
Bma06g00049 341 SMART serkin_6 19 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00049 341 Pfam Protein kinase domain 36 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00049 341 SUPERFAMILY Protein kinase-like (PK-like) 35 293 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00049 Bma08g00058 CCT
Bma03g00899 Bma06g00049 CCT
Bma06g00049 Bma08g00058 ECH
Bma03g00899 Bma06g00049 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00049 Bma-Chr6:825598 Bma08g00058 Bma-Chr8:741666 3.55E-155 dispersed
Bma03g00899 Bma-Chr3:8936250 Bma06g00049 Bma-Chr6:825598 1.96E-175 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66520 PF00069 Pkinase 3.50E-44 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00049 - - tcc:18604172 455.292