Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00066 ATGAAAAACCTTCTAAAAAAGCTGCATATAGTCTCCACTCAATCAGAAGATGCAAAAGGGTCAACTTCATCAAGAACCAACAAGTTTGCTCATAGTTCATCTCCTGATAGGCTGCACTCAAGGTCCCATCATAATTCTGAGCACAAGCCATTTTCCGGGCTATCAAATTGGCTAAACTCTGTTACTAATAGACATAGTCACAGCTCCCAATCTAGTTCTCATGTCAGAGGAGAGAGAATGGAACCTTCTGATTCTGGTAGTGCCAGTGGCTTAGAGGTCGTTTTGGACACTGCAAAGTGCGATTCTGTATCGAGCAACTCTAGAGATCCTGACATTGATGAACAACATCAGATTCAGCTGGCTTTGGAGTTGAGTGCTAGAGAAGATCCTGAGGCTGTGCAGATTGAGGCTGTAAAGCAGATTAGTTTGGGCTCTTGTGATCCTGAAAATACTCCGGCTGAAGTTATCGCCTACCGTTACTGGAATTACAATTGTCTTAGCTATGATGATAAGATCATGGATGGCTTCTATGATCTCTATGGAGTCTTAACCGAATCTACCTCAGATAGAATGCCATCTCTAGTCGATCTGCAAGGAACTCCATTGTCAGACAGTGTCACTTGGGAAGCAATCCTGGTCAACAGAGCTGCTGATGCAAACTTACTGAAACTTGAGCAGATGGCCTTGGAGATTGTTATCAAGAATCGGTCAAATGATCTCGTTTTTGCGGATAGAAATTTGGTTCGACAGCTTGCTGAATTAGTAGCTAACCAAATGGGAGGACCAGTTGCGGATCCTGAAAAGATGACAAGAAAATGGAAAAACCTTAGTTACACGTTGAAAGCAACTCTTGGTAGCTTGGTTTTGCCTCTTGGTTCTTTAACAGTTGGGTTGGCTCGTCATCGTGCGTTGTTATTCAAGCTTTTGGCAGATGGTGTGGACATTCCATGTCGATTGGTGAAAGGACATCAATACACTGGTTTCGATGATGTGGCTATGAACTTTGTAAAGATTGATGATGGAAGGGAGTACATTGTTGATCTAATGGCAGATCCTGGCACACTTATTCCGGCTGATGCAGCTCTACCACGTGTAGCATACGATGAATCTAACTTTCATCCCACTCCATTTAGAGATGTCGGTTCTTCAAGCAGTGGGATTGGGAGTTCTTTCGAGGAAAATGCAGATTTTGGGACATTGGATAAGAAATCAGCATTCAACAATTTCAGTTCTTCTGATGATAAAGTAGAATCCACTTCTTATGCAAATGTAAGTGGCCCCAGCAGAAGCGGGGAAGGATTGAAGAAACATTCAGATAATAGTAAAAATTCTTCCAATGCAGAGAAGGCCCAAGTGCAAGATTCGCCTGGCCGGTCTTACATGCATACTAGATCACCTTCGTGGACAGAAGGCGTTAGCTCACCTGCTGTGCGTAGAAAGAAAGTTAAAGATGTTTCACAATATATGATCGATGCAGCCATAGAGAATCCGCAATTGGCTCAGAAGCTCCACAATGTCTTGCTTGAAAGTGGGGTTGTTGCTCCTCCCAACTTATTTACTGAAATTTATAACGATCAGTTAGATATGTCTAATCCTGAAACCAAATCCGATGAAATGAAGAAGCAGATAAGCTCCAAAGAAGATTCAGGCCATAATGGTGATAACCCAGGTCAAATTTTGCCTCCCTTGCCACAACAAAAAGGTAACTTTAGAACGAGTCCTACTGGCAAGCCACAACATGTCAAACATGCAGACTCATCAGGGGCCAACTTTCCTCCTGAGACCAGGGAGCCAATTGGACAACCTATCTTGATACAGACAGACACAGCTCCTGGGAAGTACAGCCGAAAGGTTCCAGTTGCGGCGGCTGCGGCTGCTGCAGCGGCTGTTGTTGCATCTTCCATGGTGGTGGCTGCAGCAAAGTCGAGTGCCGACGCTGGTCTTGAACTTCCAGTGGCAGCAGCTGCCACTGCCACTGCTGTTGCTGTGGTAGCCACAACGGCTGCTGTGAGTAAGCAGTATGAGCAGGTGGATCTAGATGGTGCTTTTTATGAACCGATGGGTATTTGGGTCAGGGAAAATGATGGGTTGGGATCCATTTTAGAAGGTGAGAGAATATCAGATAGATCAGTTGGGAATGAAGGCACAAAGTCTGATGCTACACTTGATGATGTTGCCGAGTGTGAGATTGCATGGGATGAAATCACCTTGGGTGAGCGTATCGGACTTGGATCATACGGGGAGGTGTATCGTGGTGACTGGCTCGGAACGGAGGTTGCTGTGAAGAGGTTTCTCGACCAAGATATTTCAGGTGAAATGCTAGAAGAATTCAAAAGTGAGGTGCGGATAATGAAAAGAATTCGTCATCCCAACGTTGTTCTCTTCATGGGAGCTGTGACCCGAGCTCCCAATCTTTCGATCATTACCGAATTTCTTCCTAGAGGTAGTTTGTACAGATTAATTCACAGACCTAACAACCAACTCGACGAACGAAAGTGCTTAAAAATGGCCCTTGATGCGGCTCGAGGGATGAATTATTTGCACAACTGCAGTCCGGTCATCGTACACCGTGATTTAAAATCGCCAAATCTTCTCGTCGATAAAAATTGGGTGGTGAAGGTATGCGATTTCGGCTTATCACGAATGAAGCACAATACATATCTCTCTTCAAAATCAACTGCAGGAACTGCTGAGTGGATGGCTCCGGAGGTGCTAAGAAACGAACCTTCGGACGAAAAATGTGATGTTTTTAGTTATGGGGTGATATTGTGGGAGTTGTCGACTCTTCGACAGCCATGGGGAGGAATGAACCCAATGCAAGTTGTGGGTGCGGTTGGATTCCAACATCGCCGGCTCGACATACCGGACAATATGGATCCCGCCATTGCAGACATTATAACCAAATGCTGGCAAACAGATCCAAAACTGAGACCCACATTTGCTGAGATCATGGCTGCTCTAAAGCCATTGCAGAAGCCTATGAACAGCTCTCAATCTCACAGAGCGGCTCGAGTTGCAGAATCCTTAGTCGGCTAG 3036 45.09 MKNLLKKLHIVSTQSEDAKGSTSSRTNKFAHSSSPDRLHSRSHHNSEHKPFSGLSNWLNSVTNRHSHSSQSSSHVRGERMEPSDSGSASGLEVVLDTAKCDSVSSNSRDPDIDEQHQIQLALELSAREDPEAVQIEAVKQISLGSCDPENTPAEVIAYRYWNYNCLSYDDKIMDGFYDLYGVLTESTSDRMPSLVDLQGTPLSDSVTWEAILVNRAADANLLKLEQMALEIVIKNRSNDLVFADRNLVRQLAELVANQMGGPVADPEKMTRKWKNLSYTLKATLGSLVLPLGSLTVGLARHRALLFKLLADGVDIPCRLVKGHQYTGFDDVAMNFVKIDDGREYIVDLMADPGTLIPADAALPRVAYDESNFHPTPFRDVGSSSSGIGSSFEENADFGTLDKKSAFNNFSSSDDKVESTSYANVSGPSRSGEGLKKHSDNSKNSSNAEKAQVQDSPGRSYMHTRSPSWTEGVSSPAVRRKKVKDVSQYMIDAAIENPQLAQKLHNVLLESGVVAPPNLFTEIYNDQLDMSNPETKSDEMKKQISSKEDSGHNGDNPGQILPPLPQQKGNFRTSPTGKPQHVKHADSSGANFPPETREPIGQPILIQTDTAPGKYSRKVPVAAAAAAAAAVVASSMVVAAAKSSADAGLELPVAAAATATAVAVVATTAAVSKQYEQVDLDGAFYEPMGIWVRENDGLGSILEGERISDRSVGNEGTKSDATLDDVAECEIAWDEITLGERIGLGSYGEVYRGDWLGTEVAVKRFLDQDISGEMLEEFKSEVRIMKRIRHPNVVLFMGAVTRAPNLSIITEFLPRGSLYRLIHRPNNQLDERKCLKMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHNTYLSSKSTAGTAEWMAPEVLRNEPSDEKCDVFSYGVILWELSTLRQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAIADIITKCWQTDPKLRPTFAEIMAALKPLQKPMNSSQSHRAARVAESLVG 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1049558 1057063 - Bma022677.1 Bma06g00066 83568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00066 1011 Gene3D Phosphorylase Kinase; domain 1 728 812 - -
Bma06g00066 1011 CDD STKc_MAP3K-like 741 987 - -
Bma06g00066 1011 MobiDBLite consensus disorder prediction 531 548 - -
Bma06g00066 1011 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1002 - -
Bma06g00066 1011 ProSitePatterns Protein kinases ATP-binding region signature. 741 762 IPR017441 GO:0005524
Bma06g00066 1011 MobiDBLite consensus disorder prediction 49 70 - -
Bma06g00066 1011 MobiDBLite consensus disorder prediction 8 31 - -
Bma06g00066 1011 Pfam Protein tyrosine and serine/threonine kinase 735 987 IPR001245 GO:0004672|GO:0006468
Bma06g00066 1011 MobiDBLite consensus disorder prediction 565 580 - -
Bma06g00066 1011 MobiDBLite consensus disorder prediction 529 601 - -
Bma06g00066 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 854 866 IPR008271 GO:0004672|GO:0006468
Bma06g00066 1011 MobiDBLite consensus disorder prediction 444 472 - -
Bma06g00066 1011 MobiDBLite consensus disorder prediction 992 1011 - -
Bma06g00066 1011 Gene3D Transferase(Phosphotransferase) domain 1 814 1001 - -
Bma06g00066 1011 MobiDBLite consensus disorder prediction 408 479 - -
Bma06g00066 1011 ProSiteProfiles Protein kinase domain profile. 735 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00066 1011 PRINTS Tyrosine kinase catalytic domain signature 895 905 IPR001245 GO:0004672|GO:0006468
Bma06g00066 1011 PRINTS Tyrosine kinase catalytic domain signature 809 822 IPR001245 GO:0004672|GO:0006468
Bma06g00066 1011 PRINTS Tyrosine kinase catalytic domain signature 958 980 IPR001245 GO:0004672|GO:0006468
Bma06g00066 1011 PRINTS Tyrosine kinase catalytic domain signature 914 936 IPR001245 GO:0004672|GO:0006468
Bma06g00066 1011 PRINTS Tyrosine kinase catalytic domain signature 848 866 IPR001245 GO:0004672|GO:0006468
Bma06g00066 1011 Pfam Ethylene-responsive protein kinase Le-CTR1 153 356 - -
Bma06g00066 1011 MobiDBLite consensus disorder prediction 1 91 - -
Bma06g00066 1011 MobiDBLite consensus disorder prediction 408 427 - -
Bma06g00066 1011 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1002 - -
Bma06g00066 1011 MobiDBLite consensus disorder prediction 32 48 - -
Bma06g00066 1011 SUPERFAMILY Protein kinase-like (PK-like) 721 986 IPR011009 -
Bma06g00066 1011 SMART serkin_6 735 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00365 Bma-Chr1:3011714 Bma06g00066 Bma-Chr6:1049558 1.93E-31 dispersed
Bma02g01391 Bma-Chr2:56185935 Bma06g00066 Bma-Chr6:1049558 1.16E-07 dispersed
Bma04g01600 Bma-Chr4:51913916 Bma06g00066 Bma-Chr6:1049558 4.34E-08 dispersed
Bma06g00066 Bma-Chr6:1049558 Bma10g00075 Bma-Chr10:773719 3.65E-40 dispersed
Bma12g00582 Bma-Chr12:25424967 Bma06g00066 Bma-Chr6:1049558 4.93E-50 dispersed
Bma06g00066 Bma-Chr6:1049558 Bma04g00428 Bma-Chr4:3515283 1.12E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66521 PF07714 PK_Tyr_Ser-Thr 1.20E-67 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00066 - - pper:18776750 1383.62