Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00076 ATGTCGTCGCTGGGTTCAACTTACGACGACGACGACGACGGCTCCTTATCGGAACCCACCGTGTCTGACCAACCACCGATTCCTTTGGTGGCGGAACCCTCGACTGAACCATCGCCCTCATCGACCGAATCTGACCTTGAAGAGAAGCCTTGTACTTCATCTCCATTGTCAAAACCTGCTGCTCCGACTCCTTCCGAGATCCCTCTCTCGTGGCCATCCGATGGTAAGCTTAGCATCCAATGGATTCTCAATCTAACGGCCTCCTTCGAATGGTCTTCCAGAAATTTGCCTCCCTCTGCTTTTCCCTCTGTTCTGCCGGTTTCTGTGTTTGATAGTCTGGTTCTCGCTGCCTCTAAGATTCTTCACAAGGAACCTAATTGCCTGACAATTCTTGACGATTTTGTCGAAAGCAGCACCGATTCAGTTGTGGTTGTCGTTGGAGATATTCACGGCCAGTTGCATGATCTCCTCTTTCTCTTTCAAGACGCAGGCTTTCCTTCTGAAAATCGCTTCTTTGTCTTCAATGGCGATTACGTTGACAGAGGGGCTTGGGGTCTTGAAACTTTTTTGATGTTATTGGCATGGAAGGTTTTTATGCCGCATCGAGTATTTCTTCTTCGAGGAAACCATGAATCGAAGTATTGCACATCTGTTTACGGGTTTGAAAAGGAAGTGCTCGAAAAATATGGAGACAAAGGTAAGCATGTTTATCGAAAGTGTTTGGGATGCTTTGAAGGGCTGCCTTTGGCCTCCATCATCGCTGGAAATGTTTATACGGCTCACGGGGGGCTTTTCCGCAGTGTAACAGTGCCCACATCAAAGAGATCAAAAGGAAAGAAGAATCGTAAAATAATTGTGAATTCTGAATCTAACGCTATATCTCTTGGTTCTTTGGAAGAACTGCAGAAGGCTAGGCGATCGGTTCTTGATCCTCCGTGGGAAGGTTTAAATTTGATTCCTGGCGATGTTCTTTGGTCTGATCCATCAATGAATCCTGGTCTTTCTCCAAATAAAGAGAGAGGCATAGGCTTGTTATGGGGCCCTGATTGCACTGAAGAGTTCTTGAAGAAATTTCAACTAAAGTTGATTATTAGATCTCATGAAGGTCCCGACGCTCGAGAAAAGAGGCCGGGTCTTTCAGGAATGCAGGAAGGCTACACCATAGATCATGTTGTTGAGTCAGGGAAGCTAATTACTTTGTTCAGTGCTCCAGACTACCCTCAGTTTCAGGCTTCCGAGGAAAGGTACAAAAACAAAGGTGCATATATTGTTTTGGAGGCACCAAATTTTGATGTTCCGGTATTTCATAGTTTTGAAGCAGTCAGTCCTAGGCCGAAGGTATTGTTCGATCGACAGTTATAA 1362 45.52 MSSLGSTYDDDDDGSLSEPTVSDQPPIPLVAEPSTEPSPSSTESDLEEKPCTSSPLSKPAAPTPSEIPLSWPSDGKLSIQWILNLTASFEWSSRNLPPSAFPSVLPVSVFDSLVLAASKILHKEPNCLTILDDFVESSTDSVVVVVGDIHGQLHDLLFLFQDAGFPSENRFFVFNGDYVDRGAWGLETFLMLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLEKYGDKGKHVYRKCLGCFEGLPLASIIAGNVYTAHGGLFRSVTVPTSKRSKGKKNRKIIVNSESNAISLGSLEELQKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNKERGIGLLWGPDCTEEFLKKFQLKLIIRSHEGPDAREKRPGLSGMQEGYTIDHVVESGKLITLFSAPDYPQFQASEERYKNKGAYIVLEAPNFDVPVFHSFEAVSPRPKVLFDRQL 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1187675 1190193 + Bma022688.1 Bma06g00076 83578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00076 453 MobiDBLite consensus disorder prediction 34 60 - -
Bma06g00076 453 ProSitePatterns Serine/threonine specific protein phosphatases signature. 206 211 IPR006186 GO:0016787
Bma06g00076 453 Pfam Calcineurin-like phosphoesterase 143 370 IPR004843 GO:0016787
Bma06g00076 453 CDD MPP_PP7 71 447 IPR041754 -
Bma06g00076 453 SMART pp2a_7 105 452 IPR006186 GO:0016787
Bma06g00076 453 MobiDBLite consensus disorder prediction 1 69 - -
Bma06g00076 453 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 48 447 - -
Bma06g00076 453 SUPERFAMILY Metallo-dependent phosphatases 103 443 IPR029052 -
Bma06g00076 453 PRINTS Serine/threonine phosphatase family signature 142 169 IPR006186 GO:0016787
Bma06g00076 453 PRINTS Serine/threonine phosphatase family signature 205 229 IPR006186 GO:0016787
Bma06g00076 453 PRINTS Serine/threonine phosphatase family signature 302 329 IPR006186 GO:0016787
Bma06g00076 453 PRINTS Serine/threonine phosphatase family signature 396 412 IPR006186 GO:0016787
Bma06g00076 453 PRINTS Serine/threonine phosphatase family signature 172 199 IPR006186 GO:0016787
Bma06g00076 453 PRINTS Serine/threonine phosphatase family signature 242 268 IPR006186 GO:0016787
Bma06g00076 453 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 48 447 - -
Bma06g00076 453 Gene3D - 102 450 IPR029052 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00076 Bma-Chr6:1187675 Bma12g00687 Bma-Chr12:29471453 2.72E-50 dispersed
Bma03g00293 Bma-Chr3:2199821 Bma06g00076 Bma-Chr6:1187675 2.84E-95 transposed
Bma03g00935 Bma-Chr3:9850090 Bma06g00076 Bma-Chr6:1187675 1.44E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00076 K04460 - csv:116402529 710.294