Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g00078 | AGTGGATTTGGAGATTTCATTTTTATAGACAAAGAATGTAAGTCCCCCATTGACGACCAGCCAGTTCCCATGTTCTTAGAAGACTCAGAAGCAGTGCTTGATGAGGAAAAGACTCAGATGGAGGTTGAAATGGACGATGTAGAGGAGGAGCATATTTCCGACATCGACAGCTGCGACGCGAAGAATCCACTTGCAGCCGTCGATTATGTCGATGATCTATATGCATATTATAGAAAGATGGAGTGTTTTAGCTGTGTTTCACCAAACTACATGGCCCAACAATCTGATATCAATGAAAAAATGAGAGCCATTTTGATTGATTGGCTAATTGAGGTGCACGATAAGTTCGAGCTGATGAGCGAGACATTATATCTCACGGTGAATGTAATAGATAGATTTTTGGCCCACCAAAAGGTTGTAAGAAGGAAGCTTCAATTGGTGGGGTTGGTTGCCATGCTCCTGGCTTGCAAATACGAGGAAGTGTCGGTTCCCGTGGTGAGCGATTTGATCGCTATATCGGACAACGCTTACTCTAGAAAAGACGTAATCGAAATGGAGACATTGATGCTAAATACACTACAATTCAATATGTCGGTCCCAACGCCTTATGTTTTCATGCGAAGATATCTCAAGGCTGCTCAATCTGACAAAAAGGTGGAGCTATTATCCTTCTTCTTGCTGGAGCTTTGTCTGGTGGAATATGAAATGGTCAAATACCCACCATCTTTGTTAGCTGCTTCTGCAATACACACAGCTCAGTCCGGTCTCAACGGATACCGGCGATGGAGCAGGACTTGCGAGCGGCATTCGAGCTATTCACAGGACGAGCTACTGGAATGTTCAAGAATGATGATAGGATTTCATCAAAATGCAGCAACTGGGAAATTAAGGGCAGTGCATAGTAAGTATGGTACATCCAAGATGGGGTATATTTCGAAAAATGAAGCAGCTGTACTCAAATTACAGTGA | 969 | 43.14 | SGFGDFIFIDKECKSPIDDQPVPMFLEDSEAVLDEEKTQMEVEMDDVEEEHISDIDSCDAKNPLAAVDYVDDLYAYYRKMECFSCVSPNYMAQQSDINEKMRAILIDWLIEVHDKFELMSETLYLTVNVIDRFLAHQKVVRRKLQLVGLVAMLLACKYEEVSVPVVSDLIAISDNAYSRKDVIEMETLMLNTLQFNMSVPTPYVFMRRYLKAAQSDKKVELLSFFLLELCLVEYEMVKYPPSLLAASAIHTAQSGLNGYRRWSRTCERHSSYSQDELLECSRMMIGFHQNAATGKLRAVHSKYGTSKMGYISKNEAAVLKLQ | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1217076 | 1218546 | + | Bma022691.1 | Bma06g00078 | 83580 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g00078 | 322 | Gene3D | - | 72 | 313 | - | - | |
Bma06g00078 | 322 | PANTHER | CYCLINS | 2 | 319 | IPR039361 | - | |
Bma06g00078 | 322 | PIRSF | Cyclin_A_B_D_E | 9 | 322 | IPR039361 | - | |
Bma06g00078 | 322 | CDD | CYCLIN | 198 | 284 | IPR013763 | - | |
Bma06g00078 | 322 | SMART | Cyclin_C_2 | 200 | 317 | IPR004367 | - | |
Bma06g00078 | 322 | Gene3D | - | 86 | 198 | - | - | |
Bma06g00078 | 322 | Pfam | Cyclin, C-terminal domain | 200 | 313 | IPR004367 | - | |
Bma06g00078 | 322 | PANTHER | CYCLIN-B2-1 | 2 | 319 | - | - | |
Bma06g00078 | 322 | SUPERFAMILY | Cyclin-like | 61 | 197 | IPR036915 | - | |
Bma06g00078 | 322 | CDD | CYCLIN | 101 | 190 | IPR013763 | - | |
Bma06g00078 | 322 | Pfam | Cyclin, N-terminal domain | 72 | 198 | IPR006671 | - | |
Bma06g00078 | 322 | SMART | cyclin_7 | 107 | 191 | IPR013763 | - | |
Bma06g00078 | 322 | SMART | cyclin_7 | 204 | 286 | IPR013763 | - | |
Bma06g00078 | 322 | Coils | Coil | 30 | 50 | - | - | |
Bma06g00078 | 322 | SUPERFAMILY | Cyclin-like | 199 | 314 | IPR036915 | - | |
Bma06g00078 | 322 | ProSitePatterns | Cyclins signature. | 102 | 133 | IPR006671 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g00078 | Bma-Chr6:1217076 | Bma11g00315 | Bma-Chr11:2966020 | 3.70E-76 | dispersed | |
Bma14g01920 | Bma-Chr14:40983192 | Bma06g00078 | Bma-Chr6:1217076 | 1.48E-13 | transposed | |
Bma01g00703 | Bma-Chr1:6423557 | Bma06g00078 | Bma-Chr6:1217076 | 6.49E-135 | wgd | |
Bma01g02408 | Bma-Chr1:81648498 | Bma06g00078 | Bma-Chr6:1217076 | 1.55E-126 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g00078 | K21777 | - | qsu:112016128 | 474.937 |