Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00107 ATGGAAGCAGTCGGAGAAATTGAAGAAGGGCTGGGTGCTTTGAGACAGACTTTTAAAAGTGGAAGAACTCGAAGCGTCGCGTGGAGGAAGACCCAGTTGAATGCCCTTCTCCGGCTCATTCGCGAAAAAGAAGACAGAATTTTCGAAGCACTTCATCGTGATCTTGGAAAACATCCCGTCGAATGCTACCGCGATGAGATCGGAGTAGTTGAAAAATCAGCGACCGGAGCTTTGAGCTCCGTAGAGAAATGGATGGCGCCGAAGAAAAGTCGGATTCCATTACTGTTCTTCCCTGCCAAAGGTGAAGTTTTTCCTGAACCCTTCGGGCTAGTTCTCATATTTGCGTCCTGGAACTTCCCCATCTCTTTGGCTTTAGACCCTTTGATCGGAGCAATATCGGCGGGAAATACTGTGGTTTTGAAACCCTCAGACCACGCTAAAGCCTGCTCCAATTTTCTTGCTGAAACGCTTCCTCTTTACTTGGATACCAGCGCCGTTAAGGTTTTTGAGGGCGGAGCAGAAATCAGCGAACTCCTCCTCCGTCACAAATGGGATAAAATTTTCTTTACTGGGAGTCCACGGATTGGACGGATAGTGATGTCTGCGGCAGCCAAGCACTTAACGCCGGTGACGTTAGAGCTAGGAGGAAAGTGCCCTGCAATTCTCGACCACTTCTCTAGTTCTTCAGATATTAAGGTTGTGGCAATCAAAAGAATCGTCGGTGGAAAATGGGGACCTTGCTCCGGACAGGCATGTATAGGAATCGATTACGTTCTTGTGGAGAAGAACTTCGTTTCTACTTTGATTGAATTACTGAAGAAATTCATACTGAGGTTTTATGGCGAGGAACCGAAAAATTCGAAGAGTATCGCCAAAATTGTGAATAAACATCAGTTTAATCGACTCTGCAATCTGCTGAACGATCCAAGGATCGGTTCTTCGATTGTTCATGGCGGCTCTGTAGAGGAAGAAAGGCTGTTCATCGAACCAACCATATTGCTGGATCCTCCTCTTGATTCTGAGATAATGACGGAGGAAATATTCGGCCCTATTCTTCCGATCATCACGCTGAATGACATCGGAGAAAGCGTGGACTTCATTAATTCGAGGGGGAAACCTCTCGCGATTTACGCTTTCACCGAAAACGAATCGTTCAGGAGGCGAATCGTGTCGGAAACCTCCTCCGGCAGCGTGACGTTCAACGATACGATGGTTCAGTTCTTGTGCGATTCGCTTCCGTTTGGGGGAGTGGGGCAGAGTGGATTCGGGAGGTATCATGGGAAGTATTCGTTCGATACTTTCAGCCATGAAAAAGCCATTCTGCAGAGGAGCTTCTTCCCGGAGCTGGAGCCCAGGTATCCGCCATGGAATGAGTTCAAGCTCAGCTTTATCAGATTGGCTTACAGGTTCAACTACTTGGGAATCCTGTTGCTGCTTTTGGGTTTGAAGAAATAA 1455 47.29 MEAVGEIEEGLGALRQTFKSGRTRSVAWRKTQLNALLRLIREKEDRIFEALHRDLGKHPVECYRDEIGVVEKSATGALSSVEKWMAPKKSRIPLLFFPAKGEVFPEPFGLVLIFASWNFPISLALDPLIGAISAGNTVVLKPSDHAKACSNFLAETLPLYLDTSAVKVFEGGAEISELLLRHKWDKIFFTGSPRIGRIVMSAAAKHLTPVTLELGGKCPAILDHFSSSSDIKVVAIKRIVGGKWGPCSGQACIGIDYVLVEKNFVSTLIELLKKFILRFYGEEPKNSKSIAKIVNKHQFNRLCNLLNDPRIGSSIVHGGSVEEERLFIEPTILLDPPLDSEIMTEEIFGPILPIITLNDIGESVDFINSRGKPLAIYAFTENESFRRRIVSETSSGSVTFNDTMVQFLCDSLPFGGVGQSGFGRYHGKYSFDTFSHEKAILQRSFFPELEPRYPPWNEFKLSFIRLAYRFNYLGILLLLLGLKK 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1523269 1525448 + Bma022726.1 Bma06g00107 83609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00107 484 PANTHER ALDEHYDE DEHYDROGENASE 11 484 IPR012394 GO:0006081
Bma06g00107 484 SUPERFAMILY ALDH-like 6 456 IPR016161 GO:0016491
Bma06g00107 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 438 IPR016162 GO:0016491
Bma06g00107 484 PIRSF ALDH 2 478 IPR012394 GO:0006081
Bma06g00107 484 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 11 484 - -
Bma06g00107 484 Pfam Aldehyde dehydrogenase family 11 439 IPR015590 GO:0016491
Bma06g00107 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 420 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00013 Bma-Chr4:200808 Bma06g00107 Bma-Chr6:1523269 3.88E-152 dispersed
Bma06g00107 Bma-Chr6:1523269 Bma07g00256 Bma-Chr7:3200181 0 dispersed
Bma06g00107 Bma-Chr6:1523269 Bma11g00290 Bma-Chr11:2726018 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00107 K00128 - jre:108983652 738.413