Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00110 ATGGCTCTGCTAATGAGCTTCAAGTTTGTTCTCTCTCTTCTTACTGTTCTTCCTCTTTGTCTCTCTTCCAAAACAGGTGGGTTTTCTCAGCTCCACCGCCAGTTTGGGTTTTCTTATCTCCACCCCCAGTTTTACTACCATTCTTGCCCGAAAGCCCAGGAGATAGTTCAGTCTGTTTTAGCCAAAGCTTTCCAGAGAGAAGCTCGCATTGCTGCTTCTTTGCTTCGACTCCATTTTCACGACTGTTTTGTTCAGGGCTGTGATGGATCACTGTTGCTGGATGACAGCAGGAACATAGTCAGCGAAAAGCGATCGAATCCAAACAGAAACTCGGCTCGAGGGTTTGAAGTAATCGATGAGATGAAGTCTGCTCTTGAGAAAGAATGCCCTAATACTGTTTCTTGTGCAGATATCCTGGCTATGGTCGCTAGAGATGCCACTGTCATAACAGGCGGTCCGGGCTGGGAAGTACCACTAGGAAGAAGAGACTCGAGGAGCGCAAGTCTTAGCGGCTCTAACAACGATATTCCTGCTCCAAACAACACTTTCCAAACCATTCTCAGCAAGTTCACGCGACTAGGGCTCGACATTGTTGATCTTGTTGCTCTTTCAGGAGGCCACACAATTGGAAACGCCCAGTGTACTTTTTTCAGGCAGAGGTTGTACAATCAGTCAGGCAACGGCTTACCAGACCCCACACTTGACCCGTCGTATGCTGCCCAGCTGCGCACACGATGCCCCAGATCAGGGGGAGACAGGAACCTGTTTTTCTTGGACTTTGTCACGCCAGTAAGGTTTGACAACAGCTACTTCAAAAACATAGTAGCTTCAAAGGGGCTGCTTAACTCTGACCAAGTTCTTTTAACCAAGAATCAAGCGTCAGCCAACCTAGTGAAGAAATATGCTGCAGAGAATGAACTTTTCCTGGAGCAATTTCCCAAATCCATGATCAAAATGAGTCTCATCTCTCCTATAACGGGTTCCAATGGTGAAATCAGGAAAAATTGCAGGAGGGTTAACTCCAATTAG 1029 46.84 MALLMSFKFVLSLLTVLPLCLSSKTGGFSQLHRQFGFSYLHPQFYYHSCPKAQEIVQSVLAKAFQREARIAASLLRLHFHDCFVQGCDGSLLLDDSRNIVSEKRSNPNRNSARGFEVIDEMKSALEKECPNTVSCADILAMVARDATVITGGPGWEVPLGRRDSRSASLSGSNNDIPAPNNTFQTILSKFTRLGLDIVDLVALSGGHTIGNAQCTFFRQRLYNQSGNGLPDPTLDPSYAAQLRTRCPRSGGDRNLFFLDFVTPVRFDNSYFKNIVASKGLLNSDQVLLTKNQASANLVKKYAAENELFLEQFPKSMIKMSLISPITGSNGEIRKNCRRVNSN 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1540628 1542030 - Bma022728.2 Bma06g00110 83612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00110 342 PANTHER PEROXIDASE 5 340 - -
Bma06g00110 342 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 CDD secretory_peroxidase 40 339 IPR033905 GO:0004601|GO:0042744
Bma06g00110 342 SUPERFAMILY Heme-dependent peroxidases 40 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Bma06g00110 342 ProSiteProfiles Plant heme peroxidase family profile. 39 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 Gene3D Peroxidase, domain 2 177 320 - -
Bma06g00110 342 PANTHER PEROXIDASE 72-RELATED 5 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Bma06g00110 342 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma06g00110 342 Gene3D - 44 340 - -
Bma06g00110 342 Pfam Peroxidase 56 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00110 Bma09g00092 CCT
Bma06g00110 Bma09g00092 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01918 Bma-Chr1:70693447 Bma06g00110 Bma-Chr6:1540628 2.36E-72 dispersed
Bma03g00503 Bma-Chr3:3930229 Bma06g00110 Bma-Chr6:1540628 6.45E-68 dispersed
Bma06g00110 Bma-Chr6:1540628 Bma09g00092 Bma-Chr9:2440209 0 dispersed
Bma07g00235 Bma-Chr7:2843037 Bma06g00110 Bma-Chr6:1540628 1.69E-91 dispersed
Bma06g00110 Bma-Chr6:1540628 Bma08g01042 Bma-Chr8:49536459 6.15E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00110 K00430 - csv:101223204 512.301