Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00112 ATGGCCACATTAGTCGAGCCGCCGAATGGATTCAAGGCAAACGGGAAACACTATTATTCCATGTGGCAAACATTGTTCGAAATCGATACAAAATATGTTCCGATCAAACCAGTCGGCAGAGGAGCATATGGAGTGGTGTGTTCTTCCATTAACACCGAAACCAACGAGAAAGTGGCGATCAAGAAGATCAACAACGTGTTTGAAAATCGCATCGATGCGCTGAGGACTCTGAGGGAGTTGAAGCTTCTTCGGAATTTTCGACACGAGAATGTGATCGCTCTGAAGGACGTGATGATGCCGATCCATAGATCGAGCTTCAAAGATGTGTATTTGGTTTATGAGCTCATGGATACGGATCTGCACCAGATTATCAAATCCTCACAGCCACTCTCAAATGATCATTGCAAGTTTTTTGTCTTTCAGTTGCTTCGAGGGCTGAAATATCTTCACTCGGCCAATGTTCTTCACCGTGATTTGAAGCCCGGGAATCTCCTCGTTAATGCCAATTGCGACTTGAAGATTTGCTGA 528 44.7 MATLVEPPNGFKANGKHYYSMWQTLFEIDTKYVPIKPVGRGAYGVVCSSINTETNEKVAIKKINNVFENRIDALRTLRELKLLRNFRHENVIALKDVMMPIHRSSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKFFVFQLLRGLKYLHSANVLHRDLKPGNLLVNANCDLKIC 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1573649 1574395 - Bma022731.1 Bma06g00112 83614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00112 175 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Bma06g00112 175 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 175 - -
Bma06g00112 175 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 175 - -
Bma06g00112 175 ProSiteProfiles Protein kinase domain profile. 32 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00112 175 Gene3D Transferase(Phosphotransferase) domain 1 116 175 - -
Bma06g00112 175 SUPERFAMILY Protein kinase-like (PK-like) 24 175 IPR011009 -
Bma06g00112 175 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bma06g00112 175 SMART serkin_6 32 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00112 175 Gene3D Phosphorylase Kinase; domain 1 19 115 - -
Bma06g00112 175 Pfam Protein kinase domain 33 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00112 175 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00112 Bma-Chr6:1573649 Bma01g00681 Bma-Chr1:6251390 4.24E-98 dispersed
Bma01g00750 Bma-Chr1:6890977 Bma06g00112 Bma-Chr6:1573649 2.31E-114 wgd
Bma03g00980 Bma-Chr3:10453722 Bma06g00112 Bma-Chr6:1573649 5.41E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66525 PF00069 Pkinase 5.20E-37 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00112 K20537 - mnt:21387151 338.576