Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00126 ATGGCGTATTTGTGCACTGACGGTGGAAATCTGATGGCGATTGCTAACCAAGTGATGCAACAGAAACGCAAGCAAGATCAAGAGGAACAACCCCACCAACTCACGGCACTCAGTCCTTTGCTGCTTTGCCCCCTGACCAATTCTCAACAATATCCCATTCAAAGCAATTCGAATTGGAGCTTCGGTCTTTCCGGCTTCGGCTTTCCCGACGCTTTTCAAGGCGTTGGAGGAGGGTTTTCCGGCGAAACAGGGTTTCAGTTTTCAAACGTGGAGCACCAGTCTGATGGGTCTAGGTTTTGTAACTTTGAAGGAGGTGCTGGTACTGAGTTTGAGTCAGAGGAGTGGAGGCATATCTTAATGGGCGGCCTTGATTCTCCTGATAGCGCTACTCTACCTTCTGGATATGACGTTTGTCTGAACAATGACGACTGCTGTTTCTTTGGCGCTGATCCGTATCCTTCCTCCGCCACTCACATCGCCTGCGCTTTTTCTCCACCTGCCGATCTCAACCCAGTCATCTTCTCCGACACTCGAAAGACTCCGCACCTCCTTCGACTTCAAGATCCTTGTTGGACCCCGATTCTGCAACCGCTTTCACCTCAAGCAGTGGCGAGTGATGTGAAACTAGATGACCCTCCTGTTTATGAGCCTGATATCGAACCTAATCTACCGCTTTTCAAAGCCCTTGTGGATTGTGCCAGAGTGTCTGCGTTAGATCCCGAGCTCGCTATGAAAACATTGAGTCGAATCATGTTATCCATATCAGAAAAAGGGGATCCAACTGAAAGAGTAGCCTTTCACTTTTGTGAAGTTTTGCGTAGCAGAATAATTTTTCCGCCGGAAAAGAGCTTGGCCGAGACATCTTCCGAGGAAGAGATGACGTTTCTTTACAAAGTCCTGAACGACGCTTGCCCGTACGCAAAGTTCGCCCATTTAACAGCCAACCAAGCCATACTCGAAGCTTGTGAAAGAGCCAGCAGAATTCACATCGTCGACTTTGGAATCGTACAAGGTATTCAGTGGGCTGCACTTTTACAAGCGCTGGCAACCCGCTCAGCCGGAAAACCCAGTCTAATTCGGATATCAGGTATACCGGCGCCGGTTCTGGGGAAATCTCCAGCCGCATCCCTGTTTGCCACCGGAAATAGGCTTGCCGAATTTGCGAAGCTTCTCGAACTGAATTTCGAGTTCGAACCGATATTGCAGCCGATTGAGGAGCTGCAAATTTCGAGCTTTCGCGTTGGGTCGGAGGAGGTACTGGCCATCAACTTCATGCTTCAACTGTACAACTTCTTAGACGAGACTCCGGTTCAAGTTCAGAAAGTTCTTCAGCTAGCTAAATCGTTAAACCCAGATATAGTGACGTTGGGCGAGTACGAAGCGAGCTTGAGTCGACCCAGGTTTGTCAGCCGGTTCAACAACGCATTAAAATACTTCTCGGCCGTGTTCGAGTCTTTGGAGCCGAATTTGGCGAGAGACTCACCGGAGAGACTCCGACTGGAGAAATATTTACTGGGTCGCCGAATCGCAGGAGTACTCGGACGACCAGAGCCAGGGGGAAGAAAGAGAGAGCGGATGGAAGAGAAGGGACAGTGGAAAGCTCTGATGGAAAGGACTGGTTTTGAAGGGGTAGGACAAAGCCATTACGCCGTCAGCCAAGCAAAAATCCTTTTATGGAACTACAATTACAGCACCCAGTACTCAGTAATGGAATCTCCACCTGGGTTTCTCACTTTAGCTTGGAATGAAGCTCCTCTGCTCACTGTTTCTTCGTGGCGTTAA 1782 49.27 MAYLCTDGGNLMAIANQVMQQKRKQDQEEQPHQLTALSPLLLCPLTNSQQYPIQSNSNWSFGLSGFGFPDAFQGVGGGFSGETGFQFSNVEHQSDGSRFCNFEGGAGTEFESEEWRHILMGGLDSPDSATLPSGYDVCLNNDDCCFFGADPYPSSATHIACAFSPPADLNPVIFSDTRKTPHLLRLQDPCWTPILQPLSPQAVASDVKLDDPPVYEPDIEPNLPLFKALVDCARVSALDPELAMKTLSRIMLSISEKGDPTERVAFHFCEVLRSRIIFPPEKSLAETSSEEEMTFLYKVLNDACPYAKFAHLTANQAILEACERASRIHIVDFGIVQGIQWAALLQALATRSAGKPSLIRISGIPAPVLGKSPAASLFATGNRLAEFAKLLELNFEFEPILQPIEELQISSFRVGSEEVLAINFMLQLYNFLDETPVQVQKVLQLAKSLNPDIVTLGEYEASLSRPRFVSRFNNALKYFSAVFESLEPNLARDSPERLRLEKYLLGRRIAGVLGRPEPGGRKRERMEEKGQWKALMERTGFEGVGQSHYAVSQAKILLWNYNYSTQYSVMESPPGFLTLAWNEAPLLTVSSWR 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1705318 1707099 - Bma022744.1 Bma06g00126 83628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00126 593 Pfam GRAS domain family 227 593 IPR005202 -
Bma06g00126 593 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 226 592 - -
Bma06g00126 593 ProSiteProfiles GRAS family profile. 216 593 IPR005202 -
Bma06g00126 593 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 226 592 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00126 Bma-Chr6:1705318 Bma14g01407 Bma-Chr14:26610798 4.60E-59 dispersed
Bma06g00126 Bma-Chr6:1705318 Bma01g00461 Bma-Chr1:3829901 4.76E-57 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57416 PF03514 GRAS 4.70E-103 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00126 - - zju:107424599 694.886