Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00127 ATGCCTCACTCGGAGCTAATCGTATGTTTTCTTCCCTCCATTTTAGTTCTACTTCTGTTATTCATTCTCGGCAAAAGGAAGCGCAGAAAACTCAATCTTCCACCAGGAAACATGGGGTGGCCTTTTCTCGGCGAGACCATCGGTTATCTCAAGCCTTATTCCGCAACTTCCATCGGAGAATTCATGAATAAACACATTTCCAGGTACGGAAAAGTTTTCAAATCTAATTTGTTCGGCGAGCCGACAATAGTTTCGGCGGACGCAGAATTGAACAAATTCATCTTACAGAACGAAGGGAGATTGTTCGAATGCAGCTACCCTCGAAGCATCGGTGGAATTCTGGGTAAGTGGTCGATGCTAGTTTTAGTCGGAGACATGCACCGACACATGAGGATTATCTCCCTCAATTTCTTGAGCCACGCGAGGCTAAGAACACATCTTTTAAGAGAGGTAGAGAAGCACACTCTGCTTGTGCTGAAATCTTGGAAGGAGAATTCAACATTTTCAGCTCAAGACGAAGCCAAGAAGTTTACCTTCAACTTAATGGCGAAGCATATAATGAGTTTGGAAGCTGGAATGCCTGAAACAGAGCAGCTGAAGAAGGAGTACATCACTTTCATGAAAGGAGTCGTTTCAGCTCCCCTGAATTTTCCAGGAACTGCCTACAGAAAGGCTTTACAGTCTCGGTCGGCGATCCTCAAATTCATCGAGCAAAAAATGGAAGAGAGAAGAAGAAAAATGAAGGAGGGAAAAGAAAGTATCGACGACGACGATCTTCTCGGGTGGACATTGAAGCATTCAAATCTTTCAACGGAGCAAATCTTAGATTTGGTACTGAGCTTGCTGTTCGCGGGCCACGAGACGTCGTCGGTGGCAATAGCCTTAGCCATCTACTTTTTGGAAGGCTGCCCTGGCGCAATACAACAACTGAGGGAAGAGCATCTGGCAATTGCCCGGACGAAGAAGGAAACAGGGGAGGTGGAACTGGACTGGGAGGATTACAGGAAAATGGAATTCACCCAATGTGTTATTAGCGAGACACTCCGGCTTGGCAACGTGGTAAGGTTTCTTCACAGAAAGGCACTGAAAGACGTTCGGTACAGAGGTTATTTGATTCCGAGTGGGTGGAAAGTGCTGCCGGTGATCGCCGCCGTGCATTTGGACGCATTGCTTTTCGACCAACCTCACCACTTCAATCCATGGAGATGGCAGAACAGTGGTGGACGTGGGTTGTCGCCGTCGCCATCGCCATCGCCATCTCCGGCGTCTTCTTCTTCGTCGTCGTCTTCTGGAGGCCGGAGCAAGGGGACAAGTAACAACTTTATGCCATTTGGTGGAGGACCACGACTGTGCGCCGGATCAGAACTAGCCAAGCTAGAAATGGCTGTTTTCATACACCATTTGGTTCTCAACTACCAATGGGAAATGGGTGAGCTGGACCAACCTCTTGCTTTCCCTTTTGTCGATTTTCCAAATGGCTTACCCATCACAGTCCGTCACCACTCTCTCCTATAA 1515 47.66 MPHSELIVCFLPSILVLLLLFILGKRKRRKLNLPPGNMGWPFLGETIGYLKPYSATSIGEFMNKHISRYGKVFKSNLFGEPTIVSADAELNKFILQNEGRLFECSYPRSIGGILGKWSMLVLVGDMHRHMRIISLNFLSHARLRTHLLREVEKHTLLVLKSWKENSTFSAQDEAKKFTFNLMAKHIMSLEAGMPETEQLKKEYITFMKGVVSAPLNFPGTAYRKALQSRSAILKFIEQKMEERRRKMKEGKESIDDDDLLGWTLKHSNLSTEQILDLVLSLLFAGHETSSVAIALAIYFLEGCPGAIQQLREEHLAIARTKKETGEVELDWEDYRKMEFTQCVISETLRLGNVVRFLHRKALKDVRYRGYLIPSGWKVLPVIAAVHLDALLFDQPHHFNPWRWQNSGGRGLSPSPSPSPSPASSSSSSSSGGRSKGTSNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNYQWEMGELDQPLAFPFVDFPNGLPITVRHHSLL 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1710317 1712767 - Bma022745.1 Bma06g00127 83629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00127 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Bma06g00127 504 PANTHER CYTOCHROME P450 90B1 15 478 - -
Bma06g00127 504 MobiDBLite consensus disorder prediction 421 441 - -
Bma06g00127 504 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 SUPERFAMILY Cytochrome P450 29 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 Gene3D Cytochrome P450 23 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00127 504 PANTHER CYTOCHROME P450 26 15 478 - -
Bma06g00127 504 Coils Coil 233 253 - -
Bma06g00127 504 MobiDBLite consensus disorder prediction 403 441 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00991 Bma06g00127 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00127 Bma-Chr6:1710317 Bma14g01389 Bma-Chr14:26043652 7.83E-137 dispersed
Bma06g00186 Bma-Chr6:2301856 Bma06g00127 Bma-Chr6:1710317 8.23E-74 transposed
Bma07g01545 Bma-Chr7:50963017 Bma06g00127 Bma-Chr6:1710317 1.20E-24 transposed
Bma09g00093 Bma-Chr9:2502689 Bma06g00127 Bma-Chr6:1710317 3.25E-115 transposed
Bma13g00191 Bma-Chr13:2274272 Bma06g00127 Bma-Chr6:1710317 1.61E-87 transposed
Bma01g00754 Bma-Chr1:6956800 Bma06g00127 Bma-Chr6:1710317 8.23E-52 wgd
Bma03g00991 Bma-Chr3:10712519 Bma06g00127 Bma-Chr6:1710317 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00127 K09587 - jre:108995250 806.594