Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00165 ATGGGGTGTGTGAGCTCGAAGCAGGCGGTGTTAGTGACGCCTGCGTTGGATCACTCCGGTGTCTTTAAGGACAATGCCTCGTTGGGTCTTGGGCAATCGGGTCGGAGCCGTTCGGAACTGGAGAAGGAAGGGAAGTCGAAGGTGAAGGCGAGGATCAAAGCTCCGGCTGGGCTGGGGGATTCAGGTAGCGAGTTAGGTGAGTCAGGGAGAACAAGCTCGAATGGCGGAGGTGGAGAATCTTTGAGCTTCCGACTGGGGAATCTGCACAAATACCTCGAGGGGGAGCAAGTGGCTGCGGGTTGGCCGCCCTGGCTCAGCGCCGTCGCCGGAGAAGCCGTTCACGGTTGGGTTCCTGTTCGTGCTGATGCCTTCGAGAAGTTGGAAAAGATTGGACAAGGAACGTATAGTAGTGTATTTCGAGCCCGAGAGCTTGAAACAGGGAGGATAATTGCTTTGAAGAAGGTTCGATTTGATAATTTCGAGCCGGAGAGTGTTCGGTTTATGGCTCGGGAGATAACGATTCTCCGCAGGCTCGACCACCCCAACATCGTGAAATTGGAAGGCTTGATTACGTCACGATTATCGTGTAGTATATACCTCATCTTTGAGTACATGGATCATGACATTACTGGCCTACTTTCTTGTCCTGATGTCAAGTTCAGTGAATCACAGATCAAATGCTATATGAAGCAGTTGTTATCTGGGCTCGAGCATTGTCACTCTCGGGGCATAATGCATAGAGATATTAAGGGATCTAATCTCCTGGTGAACAATGAAGGAGTTTTGAAAGTAGCTGATTTTGGATTGGCCAATTTCCTTGTTTCTGTCGGTCATCGACACCCATTGACTAGTCGTGTTGTCACTTTGTGGTATCGTCCTCCGGAGCTTCTGCTCGGGTCGACAGATTATGGAGCAGCTGTTGATCTTTGGAGTGTTGGCTGTGTTTTTGCTGAACTGCTTCTTGGAAAGCCTATTCTCCAAGGGAGAACAGAGGTGGAACAACTACACAAAATTTTCAAGTTTTGTGGATCTCCTCACGAAGAATATTGGAAAAAATCGAAACTTCCGAACTCGACACTGTTCAAACCACAGCAACCTTATGAGAGTTGTCTAAGGGTGACCTTTAAAGATTTTCCTGCAACTACCGTCAACCTTCTCGAAACTCTTCTTTCTGTTGAACCATATAAACGAGGGACTGCCTCGCTTGCTCTTGCATCAGAGTATTTTGCTACAAAGCCATATGCCTGTGATCCATCGAGCATGCCAAAGTACCCACCTAGCAAAGAAATCGACGCTAAAAATCGTGAAGATGCTGGAAGGAAAAGGGTTGGTGGGAGAGCCCATGGAGCAGAAACTCGAAAGCCAACACGAAAATCTGTTGGTATCTGTAAATTGGCACCAGCAGAGGTATGCCTGGCCGTTTCTCTTTCTCTCTCTCTCTCTCTAGACGCATTACGAAAGTTTTTTTTTTTTGTGCAGGAGTTGGCATTACTAACTCGAGAGCCGGTTAAGATGAGCATTATAAATTCACAGAATCTTAAACATGAAAGAACAATCAAAGTAGGGGAGGAGTCAAAGTCCCTGGCTGGTAAACTAGAAGATGCTATTCATGTAAAGAATGCATCGCAAGGAGACATTCCCTTTTCGGGTCCTTTACAAGTTTCCACGTCGAGTGGCTTTGCATGGGCGAAAAGGCGAAGAGAAAATTCTTCTACAAGATCCCATAATCGATCCATTTCAAGAGGACACAATATAAACCCCTTGGAGTTTTCTTCCTTTTCACACTCGAGAAATAACATTGACTCAAAGATGCATCAAAATGGAGATTCTCGTGTGGATTCTAAAGGTCGCGATTCCAGTGATATCGCCAAGATTGGTTCGTGGAATCAATGGGGTAAGTTTGAACGGCCCGATTCGTTTGACGGGTCCGAAGGTTACCACTCACAAGAACTATCGTTGGCTCTTTATCAACGAGAGGAGATGGAAGCTAAGAGAAGTGCTATGGGATATCATGATCAAGAGGAAAAGGTTGAATTCTCTGGGCCGTTGTCATCTCAGTCTCATCGGATGGATGAACTTTTAGCTAGACACGAACAACAAATCCGGCGGATAGTTCGAAAAACATGGTTTCAAAGA 2136 46.35 MGCVSSKQAVLVTPALDHSGVFKDNASLGLGQSGRSRSELEKEGKSKVKARIKAPAGLGDSGSELGESGRTSSNGGGGESLSFRLGNLHKYLEGEQVAAGWPPWLSAVAGEAVHGWVPVRADAFEKLEKIGQGTYSSVFRARELETGRIIALKKVRFDNFEPESVRFMAREITILRRLDHPNIVKLEGLITSRLSCSIYLIFEYMDHDITGLLSCPDVKFSESQIKCYMKQLLSGLEHCHSRGIMHRDIKGSNLLVNNEGVLKVADFGLANFLVSVGHRHPLTSRVVTLWYRPPELLLGSTDYGAAVDLWSVGCVFAELLLGKPILQGRTEVEQLHKIFKFCGSPHEEYWKKSKLPNSTLFKPQQPYESCLRVTFKDFPATTVNLLETLLSVEPYKRGTASLALASEYFATKPYACDPSSMPKYPPSKEIDAKNREDAGRKRVGGRAHGAETRKPTRKSVGICKLAPAEVCLAVSLSLSLSLDALRKFFFFVQELALLTREPVKMSIINSQNLKHERTIKVGEESKSLAGKLEDAIHVKNASQGDIPFSGPLQVSTSSGFAWAKRRRENSSTRSHNRSISRGHNINPLEFSSFSHSRNNIDSKMHQNGDSRVDSKGRDSSDIAKIGSWNQWGKFERPDSFDGSEGYHSQELSLALYQREEMEAKRSAMGYHDQEEKVEFSGPLSSQSHRMDELLARHEQQIRRIVRKTWFQR 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2106363 2110335 + Bma031273 Bma06g00165 83667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00165 712 Pfam Protein kinase domain 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00165 712 MobiDBLite consensus disorder prediction 602 619 - -
Bma06g00165 712 SUPERFAMILY Protein kinase-like (PK-like) 117 415 IPR011009 -
Bma06g00165 712 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Bma06g00165 712 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 709 - -
Bma06g00165 712 MobiDBLite consensus disorder prediction 420 452 - -
Bma06g00165 712 MobiDBLite consensus disorder prediction 36 50 - -
Bma06g00165 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Bma06g00165 712 PANTHER CELL DIVISION PROTEIN KINASE 1 709 - -
Bma06g00165 712 Gene3D Transferase(Phosphotransferase) domain 1 207 447 - -
Bma06g00165 712 SMART serkin_6 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00165 712 MobiDBLite consensus disorder prediction 575 601 - -
Bma06g00165 712 CDD STKc_CDK9_like 124 409 - -
Bma06g00165 712 MobiDBLite consensus disorder prediction 32 78 - -
Bma06g00165 712 ProSiteProfiles Protein kinase domain profile. 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00165 712 Gene3D Phosphorylase Kinase; domain 1 111 206 - -
Bma06g00165 712 MobiDBLite consensus disorder prediction 428 452 - -
Bma06g00165 712 MobiDBLite consensus disorder prediction 563 619 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00165 Bma-Chr6:2106363 Bma14g01446 Bma-Chr14:27858824 0 dispersed
Bma05g00317 Bma-Chr5:9997295 Bma06g00165 Bma-Chr6:2106363 0 transposed
Bma11g00524 Bma-Chr11:6565236 Bma06g00165 Bma-Chr6:2106363 4.09E-20 transposed
Bma03g00839 Bma-Chr3:8003230 Bma06g00165 Bma-Chr6:2106363 2.25E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66526 PF00069 Pkinase 3.40E-68 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00165 - - zju:107419211 1009.21