Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00187 ATGGGGGAGAACCCTGAAGTGTTAGAGGCTGTGTTGAAGGAAACTGTGGATTTGGAAAATATACCTATCGAGGAAGTTTTTGAGAATCTGAGATGTAGTAGAGAGGGTCTTACCACTCAGGCTGCTGAGGAAAGGCTCGCCATTTTTGGGCACAACAAGCTCGAGGAGAAGAAGGAAAGCAAAATCTTGAAGTTTTTGGGGTTTATGTGGAACCCTCTTTCTTGGGTTATGGAAGCTGCAGCTATTATGGCTATTGCTTTAGCAAATGGCGGAGGTAAGCCCCCTGACTGGCAAGACTTTGTGGGCATCATCACTCTGCTTTTGATAAACTCCACCATAAGTTTTATCGAGGAAAACAATGCCGGTAATGCCGCAGCCGCTCTCATGGCTAGTCTAGCTCCCAAAGCCAAGGTTCTTCGAGACGGAAGGTGGAATGAGCAGGATGCTAGTGTTTTAGTTCCTGGAGATATTATCAGTATTAAACTTGGTGATATTATTCCGGCAGATTCTCGTCTTCTTGATGGGGATCCATTGAAAATTGACCAGTCGGCTCTGACCGGTGAGTCCCTTCCTGTGACCAAAGGTCCTGGCGATGGAGTTTATTCTGGTTCTACTTGCAAACAAGGGGAGATTGAAGCAGTGGTCATTGCTACCGGGGTCCACACGTTCTTCGGAAAGGCTGCTCACCTTGTCGATACGACCAATCAAGTGGGTCACTTCCAAAAGGTCTTGACTTCGATAGGGAATTTCTGCATATGTTCGATCGCTGTAGGGATGATTATCGAGATTATCGTAATGTACCCTATTCAGGACCGTGAGTATCGTCCTGGAATCGACAATCTCCTCGTTCTCCTCATTGGTGGAATTCCAATAGCCATGCCTACTGTTTTGTCGGTGACAATGGCCATTGGCTCCCACAGGCTAGCTCAGCAGGGCGCTATCACGAAGAGGATGACTGCTATCGAAGAGATGGCCGGCATGGATGTGCTTTGCAGTGACAAGACCGGAACTTTGACGCTGAATAAACTTAGTGTCGATAAAAATCTTATCGAAGTTTTTGCTAAAGGAGTAGATGCAGACACTGTGATTCTTATGGCAGCTCGAGCATCTCGAACGGAGAATCAAGATGCGATAGATACTGCCATTGTTGGGATGCTTGCCGATCCAAAGGAGGCCCGTGCTGGTATTCAGGAAATACACTTTCTTCCTTTCAATCCTACAGATAAAAGAACGGCATTGACATATCTTGATCGTGATGGTAAGATGCACAGAGTTAGCAAAGGTGCTCCGGAGCAGATTCTGAATCTCGCACACAATAAGTCAGACATTGATCGTAGAGTCCACTCTATTATTGATAAGTTTGCCGAACGAGGTTTACGATCCCTCGCCGTAGCATACCAGGAAGTCCCTGGGGGAAGCAAAGACAGTGCTGGAGGCCCATGGCAGTTTATCGGTCTCTTACCTCTATTCGATCCCCCACGCCATGATAGTGCAGAGACGATAAGGAGGGCCTTAAACCTTGGAGTTAATGTTAAAATGATCACTGGCGATCAACTGGCGATCGGAAAGGAAACAGGACGGCGTTTGGGGATGGGAACGAACATGTATCCCTCGTCTGCTTTGCTAGGACAGAACAAAGATGAGTCAATTGCTGCCTTGCCCATCGACGACCTGATAGAAAAAGCCGATGGTTTTGCTGGTGTTTTTCCTGAGCACAAATACGAGATTGTGAAGCGTTTGCAAGCTAGAAAACATATATGTGGAATGACTGGTGATGGTGTGAACGATGCTCCCGCCCTTAAAAAAGCAGACATCGGGATAGCCGTTGCCGATGCTACCGATGCAGCTCGCAGTGCTTCAGACATTGTTCTGACCGAGCCTGGACTGAGTGTTATTATAAGCGCCGTTTTAACGAGTAGAGCAATTTTTCAGAGGATGAAAAATTACACAATTTATGCGGTGTCCATAACAATCCGTATTGTGCTTGGTTTCATGTTGCTCGCTCTTATTTGGAAATTCGACTTTCCGCCATTTATGGTGCTTATCATTGCCATCCTTAATGATGGTACAATCATGACAATATCAAAGGATAGGGTCAAACCATCACCCCTGCCGGATAGTTGGAAACTGGCCGAAATCTTTGCAACTGGGGTTATACTCGGTAGCTACATGGCGATGATGACAGTCATATTTTTCTGGGCCGCATACAAAACAGACTTTTTTCCAAGAACATTCGGTGTGCCGACACTTGAGAAAACAGCCCACGATGACATCCGAAAGCTTGCCTCAGCGATATATTTGCAAGTGAGCACGATTAGCCAGGCTCTCATTTTCGTCACTCGGTCTAGAAGTTGGTCCTACGTCGAGCGTCCTGGAGTTTTACTTGTTGTGGCTTTTATCATTGCCCAGCTGATTGCAACCATAATTGCAGTTTATGCAAATTGGAGCTTTGCTGCCATTGAAGGGATCGGGTGGGGTTGGGCTGGTGTTATATGGCTCTACAACATCATCTTCTACATCCCTCTTGATTTCATTAAGTTCTTTATCCGCTATGCTCTGAGCGGGAGAGCTTGGGACCTCGTTATCGAGCAAAGGATTGCCTTCACGAGACAAAAGGACTTCGGTAAGGAACAGCGTGAGCTTCAATGGGCACATGCACAAAGAACGTTGCACGGACTGCAAGCCCCCGACGCCAAGATGTTCACTGAGCGAACTCATTTCACGGAGCTTAATCATATGGCCGAAGAAGCTAAAAGAAGAGCTGAAATTGCCAGGTTACGAGAACTGCACACCCTGAAAGGACACGTCGAATCAGTCGTGAGATTGAAGGGTCTTGACATCGAGACGATTCAGCAAGCGTACACAGTGTGA 2871 46.74 MGENPEVLEAVLKETVDLENIPIEEVFENLRCSREGLTTQAAEERLAIFGHNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMASLAPKAKVLRDGRWNEQDASVLVPGDIISIKLGDIIPADSRLLDGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTSIGNFCICSIAVGMIIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVDADTVILMAARASRTENQDAIDTAIVGMLADPKEARAGIQEIHFLPFNPTDKRTALTYLDRDGKMHRVSKGAPEQILNLAHNKSDIDRRVHSIIDKFAERGLRSLAVAYQEVPGGSKDSAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFATGVILGSYMAMMTVIFFWAAYKTDFFPRTFGVPTLEKTAHDDIRKLASAIYLQVSTISQALIFVTRSRSWSYVERPGVLLVVAFIIAQLIATIIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFTERTHFTELNHMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2314396 2319506 - Bma022802.1 Bma06g00187 83689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00187 956 SUPERFAMILY HAD-like 327 637 IPR036412 -
Bma06g00187 956 Pfam haloacid dehalogenase-like hydrolase 327 604 - -
Bma06g00187 956 CDD P-type_ATPase_H 36 847 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma06g00187 956 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Bma06g00187 956 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 853 IPR023298 -
Bma06g00187 956 Gene3D - 96 821 - -
Bma06g00187 956 PRINTS H+-transporting ATPase (proton pump) signature 766 787 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00187 956 PRINTS H+-transporting ATPase (proton pump) signature 590 606 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00187 956 PRINTS H+-transporting ATPase (proton pump) signature 621 646 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00187 956 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00187 956 PRINTS H+-transporting ATPase (proton pump) signature 562 578 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00187 956 PANTHER CALCIUM-TRANSPORTING ATPASE 3 936 - -
Bma06g00187 956 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Bma06g00187 956 Pfam E1-E2 ATPase 132 311 - -
Bma06g00187 956 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Bma06g00187 956 PRINTS P-type cation-transporting ATPase superfamily signature 590 609 - -
Bma06g00187 956 PRINTS P-type cation-transporting ATPase superfamily signature 613 625 - -
Bma06g00187 956 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Bma06g00187 956 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Bma06g00187 956 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Bma06g00187 956 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 565 678 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00187 956 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 103 351 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00187 956 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Bma06g00187 956 Gene3D - 343 490 IPR023299 GO:0000166
Bma06g00187 956 Gene3D - 328 627 IPR023214 -
Bma06g00187 956 Gene3D - 905 956 - -
Bma06g00187 956 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Bma06g00187 956 SFLD p-type atpase 313 641 IPR044492 -
Bma06g00187 956 Gene3D - 134 218 - -
Bma06g00187 956 PANTHER PLASMA MEMBRANE ATPASE 1 3 936 - -
Bma06g00187 956 SFLD C1.7: P-type atpase like 313 641 - -
Bma06g00187 956 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 36 812 IPR006534 GO:0008553|GO:0016021|GO:0120029
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00810 Bma06g00187 CCT
Bma03g00810 Bma06g00187 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00187 Bma-Chr6:2314396 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma03g00810 Bma-Chr3:7534030 Bma06g00187 Bma-Chr6:2314396 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00187 K01535 - cpap:110819640 1747.64