Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00194 ATGGCGAAATCCGGCGAAGTATGCCGGCGGAGTTTGCCGGAGGAAGGGTCCCCTCAGTGTTCGGGCCAGCTTCATGTTTTAGCTGTCGACGATAGCCATGTCGATCGGAAGGTTATCGAGAGGTTGCTTAGGATCTCCTCTTGTAAAGTGACAGCAGTAGAGAGTGGTACGAGAGCTCTTCAGTTTCTGGGGTTGGATGGAGCTAAAACATCTGGAATTGATGGTTTGAAAGTGAATCTGATAATGACAGATTACTCAATGCCTGGAATGACAGGATACGAACTGCTGAAGAAGATCAAGGTTTCCATCTTTGTCTTTCCGAAGTTCCCGGTAGTCGTGATGTCGTCCGAGAATATCTTAGCTCGTATTGATAGGTGTTTGGAGGAAGGCGCAGAAGAGTTTATAGTGAAGCCGGTGAAACTCTCCGACGTGAAGCGATTGAAAGATTCTGTGATAACGAAAGGGAAAAGCGACGAAACTAGAGGGCGGAGATCGGAAAAGAGGAAGCTTCGAGACGATGAAAACGGGTTCTCGGACAATCCCGCTAGGAATTGTGAGGTTTCCACTCAGCTACGCAAGAAGCCTAAGTTGTGCAAGATGAACTTGAGACATAATGGGATTCTTTTTTGGTGTTTATAG 639 46.95 MAKSGEVCRRSLPEEGSPQCSGQLHVLAVDDSHVDRKVIERLLRISSCKVTAVESGTRALQFLGLDGAKTSGIDGLKVNLIMTDYSMPGMTGYELLKKIKVSIFVFPKFPVVVMSSENILARIDRCLEEGAEEFIVKPVKLSDVKRLKDSVITKGKSDETRGRRSEKRKLRDDENGFSDNPARNCEVSTQLRKKPKLCKMNLRHNGILFWCL 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2365746 2366797 - Bma022809.1 Bma06g00194 83696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00194 212 Pfam Response regulator receiver domain 26 144 IPR001789 GO:0000160
Bma06g00194 212 Gene3D - 24 203 - -
Bma06g00194 212 CDD REC_typeA_ARR 26 147 - -
Bma06g00194 212 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 20 180 - -
Bma06g00194 212 SUPERFAMILY CheY-like 23 151 IPR011006 -
Bma06g00194 212 MobiDBLite consensus disorder prediction 155 177 - -
Bma06g00194 212 SMART REC_2 24 151 IPR001789 GO:0000160
Bma06g00194 212 ProSiteProfiles Response regulatory domain profile. 25 152 IPR001789 GO:0000160
Bma06g00194 212 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 180 IPR045279 GO:0009736
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00802 Bma06g00194 CCT
Bma03g00802 Bma06g00194 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00194 Bma-Chr6:2365746 Bma15g00201 Bma-Chr15:2069839 3.40E-59 dispersed
Bma03g00802 Bma-Chr3:7424151 Bma06g00194 Bma-Chr6:2365746 1.02E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57425 PF00072 Response_reg 1.20E-19 CL0304 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00194 K14492 - zju:107419317 232.261