Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00210 ATGGCTTCATCAAGCTCTTACAGTTCACCATGTGCCGCCTGCAAATTTCTCAGAAGAAAATGCTTACCAGGCTGCGTATTCGCACCTTATTTTCCACCAGAAGAACCTCAAAAATTTGCAAATGTTCACAAGATTTTCGGAGCCAGCAATGTAACGAAGCTCCTCAATGAGATTCTTCCTCATCAGAGAGAAGATGCAGTTAATTCTCTTGCCTACGAAGCAGAGGCAAGAATAAGAGATCCAGTCTTTGGCTGTACTGGCGCCATCTCATTTTTCCAACGACAAGTCCAGAGACTCCAGAAAGAGCTGGACGCTGCAAACGCCGATCTGATTCGATATTATTGCTTTGGGATCCCACCAAATTTTCAGATACAACGAGAAGTAGCTTTTGTTCAGCAAATGTCTTCTCGCATGAAACAATTTGAGTTCAACAGAATGGCCAGCAGTGAGGGAGGAGGGATAAACGAGAACCCTAATTCTTTCCCAGTCAATGACGCACTTCCTTGGAGTGAGACTTCATCTGGGTATATCAATGGAGGAGGAGCAGATGGCCTGAACAAGAGTCTCTAA 570 44.56 MASSSSYSSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKIFGASNVTKLLNEILPHQREDAVNSLAYEAEARIRDPVFGCTGAISFFQRQVQRLQKELDAANADLIRYYCFGIPPNFQIQREVAFVQQMSSRMKQFEFNRMASSEGGGINENPNSFPVNDALPWSETSSGYINGGGADGLNKSL 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2517399 2517968 + Bma022824.1 Bma06g00210 83712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00210 189 Coils Coil 89 109 - -
Bma06g00210 189 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Bma06g00210 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 184 - -
Bma06g00210 189 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Bma06g00210 189 PANTHER ELONGATED PETIOLULE 1 1 184 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00210 Bma08g00088 CCT
Bma06g00210 Bma08g00088 ECH
Bma06g00210 Bma12g01049 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00210 Bma-Chr6:2517399 Bma08g00088 Bma-Chr8:1029617 1.15E-70 dispersed
Bma06g00210 Bma-Chr6:2517399 Bma12g01049 Bma-Chr12:42560363 1.28E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57428 PF03195 LOB 2.30E-40 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00210 - - tcc:18604002 263.848