Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00217 CTCTTTCTGCTTTGTGTTCATCTGCGGCTGAGATCTCTACGTTCGAGCTTGAAAATGCAGAGCACGGCATTGACGATTTCTCCTTCATTGCCTATTCTCAAGTCTCGAAGGCAATATAATCCTGCTTTCAGCCATGGATTCAATCCCATGCGTCTTTCTTGCTCTTCTTCCAATCAGAACAGCCTCAAAAACTCCGTCAATGAGTCTCGGTCTTCGTCTTGGCCTGCCCGATCGTGGTCATTGTCTTCATTGTCTTTTCCGTCGTCCAAGGTAAGTCCGTGGACCGGTGCGCCGCTACTCGCTTCTGACTCAGGAAAGAGTGCGTTCGAGGTACGAGCTACTTCGGTGCCGGAGAGTGCAGGGGAGGATGCCAGTGATGGGGGCTTGAAGAAAACTCTTGAGCTGGGAATGTTAATGGGTCTCTGGTACCTTTTCAACATCTATTTCAATATCTACAACAAGCAGGTTCTTAAGGTCTATCCATTCCCTGTAACGGTCACTACAGTTCAATTTGCTGTTGGCACTCTGCTTGTTATTTTTATGTGGGGTTCTAATCTCTATAAAAAGCCAAAGATCAGTGGTGTACAGCTTGCCGCTATTCTTCCATTGGCAGCTGTTCATACGCTGGGAAACCTTTTTACAAACATGAGTCTTGGGAAAGTTGCTGTGTCATTCACGCACACAATCAAAGCTATGGAGCCTCTATTTTCCGTTGTCCTATCTGCCATGTTTCTAGGAGAGACACCTACTCCATGGGTGGTTATTTCTCTTCTACCAATTATTGGCGGAGTGGCATTGGCATCAGCAACTGAGGCCTCATTTAATTGGTCCGGATTTTCGAGTGCAATGGCTTCCAATTTGACTAATCAATCACGAAACGTCCTCAGCAAAAAGCTCATGGTTAAAAAAGAGGAGTCATTGGACAACATCACTCTCTTCTCAATAATTACCATTATGTCTTTTTTCTTGTTAGCACCAGTGGCTTTGTTCATGGAAGGTGTCAAGTTTACCCCGGCATATCTGCAATATGCAGGATTGAACGTCAAACAAGTGTTCATTAGATCTCTTCTTGCTGCTCTCTGTTTTCATGCTTATCAACAGGTTTCTTACATGATATTACAGAGGGTATCGCCAGTTACCCACTCAGTTGGCAACTGTGTGAAGCGGGTGGTGGTCATCGTGAGCTCTGTTATCTTCTTCCAAACACCCGTTTCTCCTATCAATAGTTTTGGCACCGCTGTGGCGCTTGCCGGAGTTTTCTTGTATTCAAGGGTCAAGCGTATAAAGAATGCAAAGGCCAAAACAGTTTGA 1311 45.16 LFLLCVHLRLRSLRSSLKMQSTALTISPSLPILKSRRQYNPAFSHGFNPMRLSCSSSNQNSLKNSVNESRSSSWPARSWSLSSLSFPSSKVSPWTGAPLLASDSGKSAFEVRATSVPESAGEDASDGGLKKTLELGMLMGLWYLFNIYFNIYNKQVLKVYPFPVTVTTVQFAVGTLLVIFMWGSNLYKKPKISGVQLAAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPLFSVVLSAMFLGETPTPWVVISLLPIIGGVALASATEASFNWSGFSSAMASNLTNQSRNVLSKKLMVKKEESLDNITLFSIITIMSFFLLAPVALFMEGVKFTPAYLQYAGLNVKQVFIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSFGTAVALAGVFLYSRVKRIKNAKAKTV 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2577921 2581012 + Bma022831.1 Bma06g00217 83719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00217 436 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 426 - -
Bma06g00217 436 SUPERFAMILY Multidrug resistance efflux transporter EmrE 179 268 - -
Bma06g00217 436 PANTHER SOLUTE CARRIER FAMILY 35 66 410 - -
Bma06g00217 436 Pfam Triose-phosphate Transporter family 134 423 IPR004853 -
Bma06g00217 436 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 133 430 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bma06g00217 436 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 66 410 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00217 Bma08g00100 CCT
Bma06g00217 Bma08g00100 ECH
Bma06g00217 Bma12g01040 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00217 Bma-Chr6:2577921 Bma12g01040 Bma-Chr12:42462244 0 dispersed
Bma06g00217 Bma-Chr6:2577921 Bma08g00100 Bma-Chr8:1212884 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00217 K15283 - csv:101203848 608.601