Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00231 ATGAAAAGGTTGAACTATTTCAAGCCCATTACAGACAATGGGAGGCTGGGGAGGAGGCTGTCGTTAGGCGAGTACAGGCGAGCAGGGTCTTGGTCCAAGTATTTGGTTTCTTCAGGGGGAGACATAAAAGGGGAAGGAGAGGAGGAATGGAGTGCCGACATGTCGCAACTGTTCATTGGGTGCAAATTTGCTACTGGAAGACATAGCAGAATCTACAGAGGAGTTTCTAATCAGAAAGATGTCGCAATTAAGCTGATTAGTCAGCCTGAGGAAGACGAAGAGTTGGCTTCTTTGCTTGAAAAACAGTTTATTTCAGAAGTCACTTTGTTGTTTCCTTTGAAGCATCCTAATATCATCACTTTCATAGCAGCTTGTAAGAAACCTCCTGTATTCTGCATTATCACTAAGTACATGGCTGGAGGTTCATTGAGAAAGTTCCTCCACCAACAAGAACCACATTGTCTTCCCCTCAATTTGGTTCTGAAACTGGCTGTCGATATTTCCCGTGGAATGAAGTATCTTCACACTCGGGGAATTCTTCATCGAGACCTTAAATCCGAGAATCTACTTCTCGACAAAGACATGAGCGTGAAGGTCGCCGATTTCGGCATATCGTGTTTGGAATCTCAGTGCAGAAGTGCCAAAGGCTTTACGATTACTTATCGTTGGATGGCTCCTGAAATGATCGAAGAGAAGCACCATACTAAGAAAGTCGATGTTTATAGCTTCGGCATTGTCTTGTGGGAGCTTTTAACGGCACTTACTCCATTCGATGACATGACTCCCGAGCAAGCTGCATTTGCTGTCTGCCGAAAGGTATTGAAAGAAAAATATATGCATCTAGAGCTATGA 852 43.9 MKRLNYFKPITDNGRLGRRLSLGEYRRAGSWSKYLVSSGGDIKGEGEEEWSADMSQLFIGCKFATGRHSRIYRGVSNQKDVAIKLISQPEEDEELASLLEKQFISEVTLLFPLKHPNIITFIAACKKPPVFCIITKYMAGGSLRKFLHQQEPHCLPLNLVLKLAVDISRGMKYLHTRGILHRDLKSENLLLDKDMSVKVADFGISCLESQCRSAKGFTITYRWMAPEMIEEKHHTKKVDVYSFGIVLWELLTALTPFDDMTPEQAAFAVCRKVLKEKYMHLEL 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2860740 2861965 + Bma022855.1 Bma06g00231 83733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00231 283 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Bma06g00231 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Bma06g00231 283 PANTHER SERINE-THREONINE PROTEIN KINASE 1 273 - -
Bma06g00231 283 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Bma06g00231 283 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Bma06g00231 283 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Bma06g00231 283 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Bma06g00231 283 SMART serkin_6 57 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00231 283 Pfam Protein tyrosine and serine/threonine kinase 62 271 IPR001245 GO:0004672|GO:0006468
Bma06g00231 283 SUPERFAMILY Protein kinase-like (PK-like) 48 276 IPR011009 -
Bma06g00231 283 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 273 - -
Bma06g00231 283 Gene3D Transferase(Phosphotransferase) domain 1 140 281 - -
Bma06g00231 283 CDD STKc_MAP3K-like 66 272 - -
Bma06g00231 283 ProSiteProfiles Protein kinase domain profile. 57 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00231 Bma-Chr6:2860740 Bma07g00378 Bma-Chr7:4688446 3.35E-93 dispersed
Bma06g00231 Bma-Chr6:2860740 Bma07g00631 Bma-Chr7:10046470 1.13E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66528 PF07714 PK_Tyr_Ser-Thr 8.90E-53 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00231 - - csv:101222762 474.937