Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00256 ATGGCTACCCCGACCACCAATATTGGCGGCGGCGATGAGGATAGGGTTATGGCCGCTGCGCAGCGGATCTTGAAGAGTCTCAATGCTCCGAAGGAGGTTCGTGAGGACATGCTTTTGATCTTCTCGAATTTCGATAACCGTCTCTCGAATATTACTCAGTTGATTAATAGCGAGGATTTGAAGAACGAGGACCGCTGTGAGGCTGCCGAAAAGGTCATTCTTAGCTGGGAAGGGCGTTCTGATGCTTCTAGGAATTCTCTTCCTTGGGAGGATTCTCCGGATGAGACGGCATTTTATTTATCGGCTGTTGATGAAGTCCTTCAGTTGATTGAGGATCTTTCGCATCGCTCTGATTCGTCTGAGATTGTAGAACGGGCGTCAAATACAATCCAGGTTGCCATGACAAGGCTTGAGGAAGAGTTTCGCCATATCTTGATCAGAAGCTCAGTCCCCCTAGATGCCGAGCACCTCTATGGCTCAATCCGCAGGGTCTCTCTGTCTTTGGCATCCAATTATGGAGAAATTGACGAAGAGTTTGAGAGCTTTGGGGAGGTTGATCGTGATTCTGGACGGTTTCACGAAAGAGGTGCAAGTTTGGGGGATGACATATGGGTCGATTTGATACATCCCGATGCGGTAGTGGAGCTGAAAGAGATTGCAGACCGCATGGTTCGCTCTGGTTATGAAAGAGAGTGTGTTCAGGTATATAGTACTGTCCGCCGGGAAGCTTTGGATGAATGTCTGATGATTCTTGGAATTGAGAAGCTGAGCATTGAGCAGATCCAGAAAATGAAATGGAAAACCTTGGACGATAAGATGAAGAAATGGGGTCAGGTTATCAAAATTGTGGCTCGAGTGCTTTTCACGGGTGAAAAGAGACTTTGTGATCATATATTTGACGGATCTGTTGAGTCTAAGGATATTTGCTTCAATGAGATTGCAAAAGGGTGTGTGATGCAGTTGTTAAATTTTGGGGAGGCAGTGGCTATTGGGGAAAGGTCCCCAGAGAAGTTATTTCAAATTTTGAGTATGTATGATTCTTTGGCCAATGCTATACCGGATTTGCAGGCAATGATTACTGATGAGTTTGTCCTGGGTGAGGCACGCCAAGTGCTATCTGGCTTGGCAGAGGCGTCCACAGGGACATTTGCAGTGTTCGAGAATGCTGTTCAGAATGAGACATCAAAGAAGCCCATGCTAAATGCTGAGATTCACCCTATAACGCGCTATGTAATGAATTATGTTAAATTGCTTGTGGATTACAGGGATACTATGGACTTACTTTTGCAAAGTGGGGAAGAGGAATTGAATCGCTTAAAGAACGAGATTGGCGATGATTTTGAGTTAGAATGTACATCACCTTTAGCTCATCGCTTGTTTTTGTTGATCTCCTGTCTGGAGGCCAATCTTGAAGAGAAATCAAAATTATATGGAGATGGAGCAATACAATATGTCTTTCTAATGAACAATATTTTGTACATTGTTCAGAAAGTGAAAGATTCTGAACTTAGAAAGCTATTGGGTGATAACTGGGTTCGCAAACGGCTTGGGAAGGTCCGCCAGCTTGCAACCAGTTACCTTCGTTCTTCTTGGATCAAGGTATTGTCTTATTTGAAAGATGGAGTTGGTGGGAGTTCGAGTAATGCCTTGAAGGGTGTTTTGAAAGAAAGATTAAGGAATTTCAATGCGGGATTTGAGGAAATCTACAGAATTCAGACGGGTTGGAAAGTACCTGATCCCCAACTTCGCGAAGATCTACGACTCTCTGTGTCCGAGAAAGTGATTCCAGCATACCGCTCCTTCATTGGAAGGTTTACGAATCCCCGAGAGAGTGGAAGACATGCTGAGAAATATGTCAAATATACAGAAGAAGATATAGCAAACTATCTATTAGACTTGTTTGAAGGATCACCCAGTATTCTCCACCACCTGCGAAGAAAAAGTACATAG 1950 44.1 MATPTTNIGGGDEDRVMAAAQRILKSLNAPKEVREDMLLIFSNFDNRLSNITQLINSEDLKNEDRCEAAEKVILSWEGRSDASRNSLPWEDSPDETAFYLSAVDEVLQLIEDLSHRSDSSEIVERASNTIQVAMTRLEEEFRHILIRSSVPLDAEHLYGSIRRVSLSLASNYGEIDEEFESFGEVDRDSGRFHERGASLGDDIWVDLIHPDAVVELKEIADRMVRSGYERECVQVYSTVRREALDECLMILGIEKLSIEQIQKMKWKTLDDKMKKWGQVIKIVARVLFTGEKRLCDHIFDGSVESKDICFNEIAKGCVMQLLNFGEAVAIGERSPEKLFQILSMYDSLANAIPDLQAMITDEFVLGEARQVLSGLAEASTGTFAVFENAVQNETSKKPMLNAEIHPITRYVMNYVKLLVDYRDTMDLLLQSGEEELNRLKNEIGDDFELECTSPLAHRLFLLISCLEANLEEKSKLYGDGAIQYVFLMNNILYIVQKVKDSELRKLLGDNWVRKRLGKVRQLATSYLRSSWIKVLSYLKDGVGGSSSNALKGVLKERLRNFNAGFEEIYRIQTGWKVPDPQLREDLRLSVSEKVIPAYRSFIGRFTNPRESGRHAEKYVKYTEEDIANYLLDLFEGSPSILHHLRRKST 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3506836 3508785 - Bma022887.1 Bma06g00256 83758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00256 649 Coils Coil 422 442 - -
Bma06g00256 649 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 50 648 - -
Bma06g00256 649 Pfam Exo70 exocyst complex subunit 274 631 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bma06g00256 649 Gene3D Exocyst complex component Exo70 89 641 - -
Bma06g00256 649 PANTHER EXOCYST COMPLEX PROTEIN EXO70 50 648 IPR004140 GO:0000145|GO:0006887
Bma06g00256 649 SUPERFAMILY Cullin repeat-like 70 635 IPR016159 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01256 Bma06g00256 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01069 Bma-Chr1:11259933 Bma06g00256 Bma-Chr6:3506836 9.69E-144 dispersed
Bma03g01256 Bma-Chr3:21081145 Bma06g00256 Bma-Chr6:3506836 0 dispersed
Bma06g00256 Bma-Chr6:3506836 Bma12g01079 Bma-Chr12:43094469 0 dispersed
Bma06g00255 Bma-Chr6:3501444 Bma06g00256 Bma-Chr6:3506836 7.36E-57 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00256 K07195 - mnt:21411514 928.317