Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g00279 | ATGACTAGTCGAGTTGTCACCCTTTGGTATCGCCCCCCCGAACTACTCCTCGGGGCTACCTTCTATGGTGCTGGTGTCGACCTTTGGAGTGCCGGCTGCATCCTGGCAGAGCTGCTGGCTGGGAAACCAATAATGCCCGGAAGAACCGAGGTTGAACAACTTCACAAGATATTTAAGTTATGTGGCTCTCCATCCGATGACTATTGGAAGAAGCATAAACTGCCCAATGCGACTCTGTTTAAGCCACAGCAACCGTACAAACGAAGCGTGGCCGAGACTTTCAAGGATTTCCCTTCATCTTCTTTACCTCTTGTCGACGCTCTTCTTTCGGCAGATCCTGACGATCGGGGCAGTGCCACAGATGCATTGAATAGCCAATTCTTTAACTCTGAGCCTCAAGCTTGTGAACCTTCGAGTCTACCAAAGTATCCTCCAAGCAAGGAAATGGACGCGAAGTTGAGAGACGAAGAAGCAAAACGGCAAAGGGGTCTAAACGGGAAAGCTAGTGCTGTCGATGGTGTCCGGAAAGTGAGAGTTCATGATAGAGTTAGTAAGGCCATTCCAGCTCCGGAAGCAAATGCGGAAATTCAAGCAAACTTAGATAGGTGGAGATTCGTGACTCAATCGAACGCAAAGAGCAAGAGCGAGAAATTCCCACCACCCCACAAGGATGGAGAGGTTGGATACCCTCGCGAAGCGACGCACAAAGGGCCCGTGTCGTTTGGTGGGGCCGAGTCGAACACCTCATTTAGCTCTTCCATTTTTAATTCTATTCCGGGATCTGTTAAAAGTGCTGGCTCTTCAGGGAAAACTTCCCGAAAGACGAAAACAAATAAGGATCCTCTAATGGCTCCGTCTCGAAAATTCATTCGTGCATTTAAGCCATCGATAGGGCTGCCGATGGATTTGTTATTTAAGGCTAAGTAA | 927 | 48.65 | MTSRVVTLWYRPPELLLGATFYGAGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDDYWKKHKLPNATLFKPQQPYKRSVAETFKDFPSSSLPLVDALLSADPDDRGSATDALNSQFFNSEPQACEPSSLPKYPPSKEMDAKLRDEEAKRQRGLNGKASAVDGVRKVRVHDRVSKAIPAPEANAEIQANLDRWRFVTQSNAKSKSEKFPPPHKDGEVGYPREATHKGPVSFGGAESNTSFSSSIFNSIPGSVKSAGSSGKTSRKTKTNKDPLMAPSRKFIRAFKPSIGLPMDLLFKAK | 308 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3892970 | 3894957 | - | Bma022914.1 | Bma06g00279 | 83781 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g00279 | 308 | MobiDBLite | consensus disorder prediction | 131 | 150 | - | - | |
Bma06g00279 | 308 | MobiDBLite | consensus disorder prediction | 260 | 283 | - | - | |
Bma06g00279 | 308 | Pfam | Protein kinase domain | 1 | 128 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g00279 | 308 | ProSiteProfiles | Protein kinase domain profile. | 1 | 128 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g00279 | 308 | PANTHER | SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 265 | - | - | |
Bma06g00279 | 308 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 265 | - | - | |
Bma06g00279 | 308 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 132 | IPR011009 | - | |
Bma06g00279 | 308 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 167 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g00279 | Bma-Chr6:3892970 | Bma05g00317 | Bma-Chr5:9997295 | 4.54E-103 | dispersed | |
Bma06g00279 | Bma-Chr6:3892970 | Bma02g00876 | Bma-Chr2:46976270 | 1.81E-85 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66529 | PF00069 | Pkinase | 4.50E-18 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g00279 | K08819 | - | zju:107404513 | 491.886 |