Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00279 ATGACTAGTCGAGTTGTCACCCTTTGGTATCGCCCCCCCGAACTACTCCTCGGGGCTACCTTCTATGGTGCTGGTGTCGACCTTTGGAGTGCCGGCTGCATCCTGGCAGAGCTGCTGGCTGGGAAACCAATAATGCCCGGAAGAACCGAGGTTGAACAACTTCACAAGATATTTAAGTTATGTGGCTCTCCATCCGATGACTATTGGAAGAAGCATAAACTGCCCAATGCGACTCTGTTTAAGCCACAGCAACCGTACAAACGAAGCGTGGCCGAGACTTTCAAGGATTTCCCTTCATCTTCTTTACCTCTTGTCGACGCTCTTCTTTCGGCAGATCCTGACGATCGGGGCAGTGCCACAGATGCATTGAATAGCCAATTCTTTAACTCTGAGCCTCAAGCTTGTGAACCTTCGAGTCTACCAAAGTATCCTCCAAGCAAGGAAATGGACGCGAAGTTGAGAGACGAAGAAGCAAAACGGCAAAGGGGTCTAAACGGGAAAGCTAGTGCTGTCGATGGTGTCCGGAAAGTGAGAGTTCATGATAGAGTTAGTAAGGCCATTCCAGCTCCGGAAGCAAATGCGGAAATTCAAGCAAACTTAGATAGGTGGAGATTCGTGACTCAATCGAACGCAAAGAGCAAGAGCGAGAAATTCCCACCACCCCACAAGGATGGAGAGGTTGGATACCCTCGCGAAGCGACGCACAAAGGGCCCGTGTCGTTTGGTGGGGCCGAGTCGAACACCTCATTTAGCTCTTCCATTTTTAATTCTATTCCGGGATCTGTTAAAAGTGCTGGCTCTTCAGGGAAAACTTCCCGAAAGACGAAAACAAATAAGGATCCTCTAATGGCTCCGTCTCGAAAATTCATTCGTGCATTTAAGCCATCGATAGGGCTGCCGATGGATTTGTTATTTAAGGCTAAGTAA 927 48.65 MTSRVVTLWYRPPELLLGATFYGAGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDDYWKKHKLPNATLFKPQQPYKRSVAETFKDFPSSSLPLVDALLSADPDDRGSATDALNSQFFNSEPQACEPSSLPKYPPSKEMDAKLRDEEAKRQRGLNGKASAVDGVRKVRVHDRVSKAIPAPEANAEIQANLDRWRFVTQSNAKSKSEKFPPPHKDGEVGYPREATHKGPVSFGGAESNTSFSSSIFNSIPGSVKSAGSSGKTSRKTKTNKDPLMAPSRKFIRAFKPSIGLPMDLLFKAK 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3892970 3894957 - Bma022914.1 Bma06g00279 83781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00279 308 MobiDBLite consensus disorder prediction 131 150 - -
Bma06g00279 308 MobiDBLite consensus disorder prediction 260 283 - -
Bma06g00279 308 Pfam Protein kinase domain 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00279 308 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00279 308 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 1 265 - -
Bma06g00279 308 PANTHER CELL DIVISION PROTEIN KINASE 1 265 - -
Bma06g00279 308 SUPERFAMILY Protein kinase-like (PK-like) 1 132 IPR011009 -
Bma06g00279 308 Gene3D Transferase(Phosphotransferase) domain 1 1 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00279 Bma-Chr6:3892970 Bma05g00317 Bma-Chr5:9997295 4.54E-103 dispersed
Bma06g00279 Bma-Chr6:3892970 Bma02g00876 Bma-Chr2:46976270 1.81E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66529 PF00069 Pkinase 4.50E-18 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00279 K08819 - zju:107404513 491.886