Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00281 ATGGAAATGGCTCTCTCCGATAACCGTCATCGATCGCTGATCCCCACCTTCCTATACTCGGGTTCTCCGTCATCGTCTCTGTCGTCGCCCAAAAGGCTCTTTGATTTTAATTCTTCCGTGAAAACGACTCTCGGATTGCCTGCATCAACCCCGCTGAGCAATGCGGCACCGAGGAGCTTCGTGATTCCTGCTCCGCGGGAGAAGATTGAGATGTACTCACCGTCTTTCTATGCTGCGTGTACCACCGGTGGAATATTGAGCTGCGGTCTTACGCACATGACCGTCACTCCTCTCGACCTTGTCAAATGCAATATGCAGATTGATCCAGCAAAATACAAGAGCATTACATCTGGTTTTGGAGTTCTGTTCAAGGAGCAGGGAGCCAAAGGATTTTTTAAGGGTTGGGTGCCTACCTTGCTAGGTTACAGTGCTCAGGGTGCTTGTAAATTTGGATTTTATGAGTTCTTTAAGAAGTACTACTCCGATATTGCGGGGCCTGAGTATGCAGCCAAGTACAAGACCTTGATATATTTAGCTGGCTCAGCATCTGCTGAAGTTATTGCTGATGTTGCTCTCTGTCCAATGGAGGCTGTGAAAGTTCGCCTCCAAACTCAGCCAGGCTTTGCTCGTGGTTTGGGTGATGGGCTTCCAAAGTTTATTAGGTCTGAAGGTGCTCTGGGATTGTACAAAGGGCTAGTTCCTCTATGGGGTCGTCAAATTCCTTATACAATGATGAAATTTGCATCTTTCGAGACTATTGTGGATATGATGTATAAATTTGCAATTCCAACGCCCAAAGACCAGTGTAGCAAATCGCTGCAGCTTGGGGTGAGCTTTGCTGGCGGATACGTGGCTGGTGTGCTCTGTGCAATCGTCTCTCACCCTGCTGACAACCTCGTGTCGTTTCTCAACAATGCCAAGGGGGCAACTGCCGGTGATGCAGTCAAGCAGCTGGGATTGTGGGGGCTTTTTACCCGTGGCCTTCCTCTTCGTATTTTAATGATTGGGACCCTTACTGGGGCTCAGTGGGGACTATATGATGCATTCAAAGTTTTTGTTGGGCTGCCGACATCTGGAGGTGCCGCTCCGCCTGCCGCCGCCGCTGTCACCGAGCTATCCAAAGGCGTGAAATGA 1134 49.47 MEMALSDNRHRSLIPTFLYSGSPSSSLSSPKRLFDFNSSVKTTLGLPASTPLSNAAPRSFVIPAPREKIEMYSPSFYAACTTGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSITSGFGVLFKEQGAKGFFKGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPMEAVKVRLQTQPGFARGLGDGLPKFIRSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVDMMYKFAIPTPKDQCSKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATAGDAVKQLGLWGLFTRGLPLRILMIGTLTGAQWGLYDAFKVFVGLPTSGGAAPPAAAAVTELSKGVK 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3948710 3951514 - Bma022916.1 Bma06g00281 83783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00281 377 PANTHER PHOSPHATE TRANSPORTER 3 368 - -
Bma06g00281 377 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
Bma06g00281 377 Gene3D Mitochondrial carrier domain 54 166 IPR023395 -
Bma06g00281 377 Gene3D Mitochondrial carrier domain 167 354 IPR023395 -
Bma06g00281 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Bma06g00281 377 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Bma06g00281 377 Pfam Mitochondrial carrier protein 176 259 IPR018108 -
Bma06g00281 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Bma06g00281 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Bma06g00281 377 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 3 368 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01227 Bma-Chr1:15251696 Bma06g00281 Bma-Chr6:3948710 0 dispersed
Bma06g00281 Bma-Chr6:3948710 Bma08g00712 Bma-Chr8:42913636 4.13E-85 dispersed
Bma06g00281 Bma-Chr6:3948710 Bma07g01583 Bma-Chr7:51132075 2.11E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00281 K15102 - twl:120004074 593.578