Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00403 ATGGGTGCACCAAAGAAAGTAGGGTCGAGGATTTCTGACGACTCTGAGGAGTTGGCTCATGTTTCCTTGCAGGCCATCCTTCTTGCTGATAGCTTTGCCACCAAGTTTCAGCCCATAACTCTCGAACGGCCTAAGGTATTACTTCCACTTGTGAATGTCCCAATGATAAATTATACCTTAGCATGGCTTGAATCTGCGGGCGTTGAAGAAGTTTTTGTATTTTGCTGTGCTCATTCAAGGCAAGTAATTGATTATTTGGAGAATTCTGAATGGTTCTCTCAACCAGAGTTCTCGGTCACAACAATAGAATCTCACAATTCTGTGAGTGCTGGAGATGCTCTGCGCTTAATCTATGAAAAGAATGTGATACATGGAGACTTTATCCTTATCACAGGAGATACAATAAGCAACATGTCACTTTCACAAGCTCTTCAGGAACACAAGGAAAGAAAGAAAAGAGATAGCAATGCAGTAATGACCATGATTATCAAACAATCGAAGCCCTCTCCTATCACTCACCAATCTCGTCTTGGTACTGATGAGCTGTTTATGGCAGTAGATCCTGACACTAAGCAACTCCTATATTATGAGGATAGAGCGGACCAATCAAAAGGGGCTATATATCTTGATAAGCTATTACTGATGGATAATCCTTTAATTTCTCTTCACAATGACAAACAAGATTGCTATATAGATGTATGTTCTCCAGAAGTCCTCAGTCTTTTCACAGATAACTTTGACTATCAGCATCTTCGACGACACTTTGTCAAAGGATTGCTTGTCGATGATATCATGGGTTACAAGATCTTTACACATGATATTCACTCGAGCTATGCGGCTAGGATTGATAATTTTCGAAGCTATGACGCGATTAGCAAGGACATTATACAGAGGTGGTCATATCCATTCGTTCCAGATGTTAAATTCTTTGGAAATTCCACGGCAAAACTTGAAAGACAGGGGATGTATAGAGCTTCAGATATTAGGCAAGCTCGTTCTGCTCTAATAGGTCCTTCTACTGTTATCGGAAAGAACACTGAAATCGGGTGCAACACCAAAATTTCAAATTCAGTTGTTGGACAAGGATGCAAAATTGGATCAAACGTTTTGATAGAAGGTTCTTACATATGGGACAATGTTACTATCGAGGACGGCTGTAAACTAAGGCATGCAATTGTTTGCGATGGAGTGTCCCTGAGATTGGGAGCTGAACTAGAACCTGGTGTAGTTTTGTCTTTCAATGTTGTTATAGGTCAACAATTTGTTGTTCCTGCATATTCAAAGGTGTCATTGTTTCAGCAACCAACCAAGCTAGATAGCGATGAGGAGCTGGAATATGCTGATAATAGCAGTGTTATTATTGAAAGTAATGATTATTACTATCTATTTTCTTTTTGGAATTTGCATGACTCTTTGAAATTGATGTCAACAAATCTTGGTGCTGGTGGTGTTGGACATATATGGTCAGATTTTGAAGGAAACATCGAGGAAAGATGGAGGCACTCAGTTGCACCCATTCCTGCGCATAAAGTTGCTGAGGCAATGCAAGCCAGAGATGATGACTTTGAGTTGTCTGCTCAAGATGGAGGCCTTCTTCCTCCTTCAGAAGAGTTGAAACCCGGTTCCAATGATTCTGAATATGATGATAATGAAGATTCTAGGGACGACTCCACTTACTTTGAAAAAGAGGTGGAAGCAACTTTCTTAAGAGCTGTGCACGAAAATATTAAAGTAGACAACGTAATATTGGAAGTGAACTCGTTACGATTATCATATAATAAAGAAGCTGCGGATTGTGCTGGGGCAATATTTTTTTCATTAATAAAATATTCCCTAGAAACTCCACATAGTTCTGCTAGTGAATTGTTGCAAAATGCTACAAGTACAATTACAAAATGGAAAAGACTCCTCAAGTCTTACCTTGCTGACTTGGATGAGGAGATAGAAGTAATTTTGAAATTTGAAGAGATGTGCGTGGAATCTGCCAAGGAATTTAATCCATACTTCGCGAAGATATTGTGTCACTTGTACGACCAAGAAATAATTCATGAGGAGGCCATTTTACGGTGGGAAGACGAGAAGAAGGACGCAGAGGAATCAGATAAAATTTTCGTCAAGCAATCTGAGAAATTTATACAATGGTTGAGAGAAGCATCAGAGGAGGAAGAGGAAGAAGAGGGAGGAGAAGATGAATGA 2196 39.66 MGAPKKVGSRISDDSEELAHVSLQAILLADSFATKFQPITLERPKVLLPLVNVPMINYTLAWLESAGVEEVFVFCCAHSRQVIDYLENSEWFSQPEFSVTTIESHNSVSAGDALRLIYEKNVIHGDFILITGDTISNMSLSQALQEHKERKKRDSNAVMTMIIKQSKPSPITHQSRLGTDELFMAVDPDTKQLLYYEDRADQSKGAIYLDKLLLMDNPLISLHNDKQDCYIDVCSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHDIHSSYAARIDNFRSYDAISKDIIQRWSYPFVPDVKFFGNSTAKLERQGMYRASDIRQARSALIGPSTVIGKNTEIGCNTKISNSVVGQGCKIGSNVLIEGSYIWDNVTIEDGCKLRHAIVCDGVSLRLGAELEPGVVLSFNVVIGQQFVVPAYSKVSLFQQPTKLDSDEELEYADNSSVIIESNDYYYLFSFWNLHDSLKLMSTNLGAGGVGHIWSDFEGNIEERWRHSVAPIPAHKVAEAMQARDDDFELSAQDGGLLPPSEELKPGSNDSEYDDNEDSRDDSTYFEKEVEATFLRAVHENIKVDNVILEVNSLRLSYNKEAADCAGAIFFSLIKYSLETPHSSASELLQNATSTITKWKRLLKSYLADLDEEIEVILKFEEMCVESAKEFNPYFAKILCHLYDQEIIHEEAILRWEDEKKDAEESDKIFVKQSEKFIQWLREASEEEEEEEGGEDE 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13811840 13819767 - Bma023153.1 Bma06g00403 83905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00403 731 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Bma06g00403 731 SUPERFAMILY ARM repeat 560 718 IPR016024 -
Bma06g00403 731 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
Bma06g00403 731 PANTHER - 7 726 - -
Bma06g00403 731 Gene3D Hexapeptide repeat proteins 305 453 - -
Bma06g00403 731 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 7 726 - -
Bma06g00403 731 MobiDBLite consensus disorder prediction 525 556 - -
Bma06g00403 731 CDD W2_eIF2B_epsilon 555 719 IPR044123 GO:0005085|GO:0031369
Bma06g00403 731 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 12 304 IPR029044 -
Bma06g00403 731 Gene3D - 548 726 - -
Bma06g00403 731 SUPERFAMILY Trimeric LpxA-like enzymes 268 430 IPR011004 -
Bma06g00403 731 CDD LbH_eIF2B_epsilon 341 419 - -
Bma06g00403 731 Pfam eIF4-gamma/eIF5/eIF2-epsilon 646 725 IPR003307 GO:0005515
Bma06g00403 731 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058|GO:0016779
Bma06g00403 731 SMART 542_3 634 721 IPR003307 GO:0005515
Bma06g00403 731 ProSiteProfiles W2 domain profile. 554 725 IPR003307 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00403 Bma-Chr6:13811840 Bma14g00004 Bma-Chr14:19179 0 dispersed
Bma06g00403 Bma-Chr6:13811840 Bma07g01203 Bma-Chr7:46800894 8.21E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00403 K03240 - mnt:21393535 1105.89