Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00434 AGAATGGCAAGGCAGTCTGAAAAATTTTCGGCTGACTTTTTCATGGGAGGAGTTGCGGCAATAATATCTAAAAGTGCAGCAGCACCTATTGATAGGGTGAAGCTTTTACTGCAAAATCAAGGAGAAATGATAAAAAGGGGACAAATCAATAGACCTTATATGGGCATTCGAGATGGATTCAAAAGGGTTTTGAGAGAGGAGGGCTTCTTTTCCTTTTGGCGAGGAAATCAGGCCAACGTTATTCGATATTTCCCTACTCAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAACGAGTTTTTGGATGCTCGAAAGAGAAAGATGGGTACTTGAAATGGTTTGCTGGGAATATAGCTTCCGGGAGTGCTGCTGGAGCAACGACTTCTCTGTTTCTGTATCATCTCGACTATGCTCGGACCCGCTTAGCCACAGACACGCTAGGATGCACCATTAATAATCAGCGCCGGTTTAAAGGTCTTCTCGATGTCTACAGTAAAACATTGGCAAGCGATGGAATTGTCGGTTTATATAGAGGTTTTAGCGTTTCAATCATGGGAATTACTTTGTACAGAGGGTTGTACTTTGGGATCTATGACACAGTGAAACCTCTTGTTTTGGTTGGTCCCTTTGAGGGCAATTTCTTTGCAAGTTTCTTCTTGGGGTGGAGCATCACTACTTTTTCCGGGGTTTGTGCTTATCCTTTCGACACGCTCCGACGGAGAATGATGATGACTTCTGGACAAAGTTTCAAATATCGCAATGGTGTGCATGCATTTCGTGAGATCATTCGCCAAGAGGGTTTTACGGCACTTTTCCGAGGAGCCGCCGCAAATATGCTTCTTGGGGTTGCCGGAGCTGGTGTTCTTGCCAGTTATGATCAGTTGAATCGCATCGTGTCAAGGCGTGATCGAGGTTTCGACTCATATCATCTTTCAAAATGA 942 43.95 RMARQSEKFSADFFMGGVAAIISKSAAAPIDRVKLLLQNQGEMIKRGQINRPYMGIRDGFKRVLREEGFFSFWRGNQANVIRYFPTQAFNFAFKGYFKRVFGCSKEKDGYLKWFAGNIASGSAAGATTSLFLYHLDYARTRLATDTLGCTINNQRRFKGLLDVYSKTLASDGIVGLYRGFSVSIMGITLYRGLYFGIYDTVKPLVLVGPFEGNFFASFFLGWSITTFSGVCAYPFDTLRRRMMMTSGQSFKYRNGVHAFREIIRQEGFTALFRGAAANMLLGVAGAGVLASYDQLNRIVSRRDRGFDSYHLSK 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16434864 16440357 + Bma023209.1 Bma06g00434 83936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00434 313 Pfam Mitochondrial carrier protein 213 300 IPR018108 -
Bma06g00434 313 Pfam Mitochondrial carrier protein 7 102 IPR018108 -
Bma06g00434 313 Pfam Mitochondrial carrier protein 113 205 IPR018108 -
Bma06g00434 313 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085
Bma06g00434 313 PRINTS Mitochondrial carrier protein signature 12 25 IPR002067 GO:0055085
Bma06g00434 313 PRINTS Mitochondrial carrier protein signature 25 39 IPR002067 GO:0055085
Bma06g00434 313 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Bma06g00434 313 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Bma06g00434 313 PRINTS Mitochondrial carrier protein signature 75 95 IPR002067 GO:0055085
Bma06g00434 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 7 100 IPR018108 -
Bma06g00434 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 298 IPR018108 -
Bma06g00434 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 204 IPR018108 -
Bma06g00434 313 Gene3D Mitochondrial carrier domain 2 304 IPR023395 -
Bma06g00434 313 PRINTS Adenine nucleotide translocator signature 9 21 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma06g00434 313 PRINTS Adenine nucleotide translocator signature 53 74 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma06g00434 313 PRINTS Adenine nucleotide translocator signature 217 233 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma06g00434 313 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma06g00434 313 PRINTS Adenine nucleotide translocator signature 112 125 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma06g00434 313 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 310 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma06g00434 313 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 2 310 - -
Bma06g00434 313 SUPERFAMILY Mitochondrial carrier 7 295 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00146 Bma-Chr6:1916004 Bma06g00434 Bma-Chr6:16434864 0 dispersed
Bma06g00434 Bma-Chr6:16434864 Bma09g00848 Bma-Chr9:47512342 2.33E-125 dispersed
Bma06g00434 Bma-Chr6:16434864 Bma15g00461 Bma-Chr15:5042597 1.16E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00434 K05863 - zju:107419129 502.286