Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00444 ATGCGTATAGGTGCAATTGTCTCGATTGCCTGTGTTGTATTAGTGGGGCTATTTGCTCTGCAGCATTATGGTACCCACAGAGTTGCATTTGTATTCGCGCCAATCGTGATACTTTGGTTGATTTCAATTTTTTCTCTTGGGCTATACAACATAGTACATTGGAACCCAAGAATTGTTAGTGCAATCTCTCCTTATTATGTTGTTAAGTTCTTTAGAGAGACCGGTTCGCTCGGAGGGATTCTTCTGTCCATAACTGGTACAGAAGCAATGTTTGCAGATCTTGGTCATTTTACTGCATCATCGATAAGGATTGCATTTGCACTTGTGGTATACCCTTGCCTGGTAGTACAATACATGGGTCAAGCTGCTTTTCTGTCTAAAAACCCCAAATCCATTTCTAGCAGTTTTTATGATTCAATACCCGGACCTGTATTTTGGCCTGTCTTCATCATTGCTACACTTGCTGCTATTGTGGGGAGTCAAGCTATTATAACTGCTACGTTTTCGATCATCAAACAGTGTCATGCCCTTGGTTGCTTTCCTCGAGTTAAAGTTATCCACACCTCAAAACTCATGTATGGTCAGATCTACATCCCGGAAATTAACTGGATACTTATGATCCTCACTCTTGCTATAACTGTCGGATTTAAAGACACAACTTTAATTGGGAATGCTTATGGACTTGCTTGTATGACAGTCATATTCGTAACGACATTCCTCATGGCACTTGTCATAATATTTGTCTGGCAGAAAAGTATCGTGTTGGCTGCAGCCTTTCTCTTATTTTTCTGCTTTGTCGAGGGGGTTTACTTGTCAGCAGCATTTACAAAAGTTCCTCAAGGAGGATGGGCACCTATTGTGCTTTCAGTCATCTTTATGCTCATCATGTATACCTGGCATTACGGGAGTCGTCAGAAATACAACTTCGATCTGCACAATAAAGTTTCCCTTAAGTGGCTACTCAGCCTAGGTCCAAGCCTAGGCATTGTTCGAGTTCCTGGCATTGGTCTCATATACTCGGAATTGGCGACTGGAGTTCCTCCGATATTTTCCCACTTCATGACGAATCTACCGGCCTTTCATCAAGTGCTCATATTCGTATGCGTCAAATCGGTTTGCCTTCCGCACGTCTCGCCCGAAGAACGTTTTCTTATTGGACGGATTGGCCCCCGATCATATCGAATGTATCGATGCGTGGTGAGGTACGGGTACAAAGACATGCAGAAGGACGATGGGGATTTGGAGAATCAGCTCATTCAAAGCATAGCCGAGTTTATTCAAATGGAAGCCAGAGACCCACAATTCTCAGGATCTGAAAGCTCGTCTTTGGACGGGAGGATGGCGGTTATACGTACAAGAACCGGACAGTCAACTTCGAACTTGGTTTTATCAGAGGTCGAGAATGTCGGCTCGAGTAATTCAATTCAAAGCTACAAATCTCAAACTCTTCAGAGTTTACAAACCATTTGTGACGAAGAGAACCCGCCAATCAGGAGGTGCCAAGTAAGGTTTCAGCTGCCTGAAAACGCCGATGTGGATTCTGCAGTGAGGGAGGAGTTGATGGATTTAATTCAGGCAAAAGAGGCCGGTGTGGCGTACATTATGGGGCACTCGTATGTAAAAGCGAGAAGAAATTCATCATTTCTGAAGAAGATAGCGATAGATATTGGCTATTCGTTTCTTCGAAAGAACTGCAGAGGTCCAGGAGTAGCTCTCAACATTCCTCATATCAGTCTTATTGAAGTTGGCATGATATACTATGTATAG 1767 43.29 MRIGAIVSIACVVLVGLFALQHYGTHRVAFVFAPIVILWLISIFSLGLYNIVHWNPRIVSAISPYYVVKFFRETGSLGGILLSITGTEAMFADLGHFTASSIRIAFALVVYPCLVVQYMGQAAFLSKNPKSISSSFYDSIPGPVFWPVFIIATLAAIVGSQAIITATFSIIKQCHALGCFPRVKVIHTSKLMYGQIYIPEINWILMILTLAITVGFKDTTLIGNAYGLACMTVIFVTTFLMALVIIFVWQKSIVLAAAFLLFFCFVEGVYLSAAFTKVPQGGWAPIVLSVIFMLIMYTWHYGSRQKYNFDLHNKVSLKWLLSLGPSLGIVRVPGIGLIYSELATGVPPIFSHFMTNLPAFHQVLIFVCVKSVCLPHVSPEERFLIGRIGPRSYRMYRCVVRYGYKDMQKDDGDLENQLIQSIAEFIQMEARDPQFSGSESSSLDGRMAVIRTRTGQSTSNLVLSEVENVGSSNSIQSYKSQTLQSLQTICDEENPPIRRCQVRFQLPENADVDSAVREELMDLIQAKEAGVAYIMGHSYVKARRNSSFLKKIAIDIGYSFLRKNCRGPGVALNIPHISLIEVGMIYYV 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16977896 16980993 - Bma023224.1 Bma06g00444 83946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00444 588 TIGRFAM kup: potassium uptake protein 5 588 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma06g00444 588 Pfam K+ potassium transporter 5 406 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma06g00444 588 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 5 588 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma06g00444 588 PANTHER POTASSIUM TRANSPORTER 4 5 588 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01233 Bma-Chr1:15528790 Bma06g00444 Bma-Chr6:16977896 0 dispersed
Bma06g00444 Bma-Chr6:16977896 Bma14g01529 Bma-Chr14:30920610 0 dispersed
Bma06g00444 Bma-Chr6:16977896 Bma06g00625 Bma-Chr6:33387765 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00444 K03549 - tcc:18601159 967.607