Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g00464 | ATGTCCCGGTTCCATGTTGGTGGGAAGGTGGTGGAAAGAGTTGAATTGTTGAGGAAGAAGCCCTTGGCCTGGCAGCTGTATGTTTGGCCTTTCGCTATTCTCTATGTTTTCTGGCTAACCGTTGTTATTCCTAGCATAGATTTTGGTGATGCTACTATTGTTCTCGGCGGGCTTGTAGCTTTCCACATTTTGGTCTGGCTTTTTACCGCATGGTCTGTTGATTTCAGATGTTTTGTTCAGTATAGTAAGGTCCATGATATTCATCATGCAAATGCTTGTAAAATAACTCCAGCAAAATTTTCTGGCTCTAAGGAAATTGTTCCGCTTCATTTCCGTAAACTAGTGATAGGTTCTTCATCCACAGTGGATATGGAAGAGATATATTTTGATTTTAGAAAACAACAATTTATCTTCTCAAATGAGAAGGAGACCTTTGCCAAGCTTCCTTATCCGACAAAAGAGATGTTTAGCTATTATCATAAGAGTAGTGGCCACGGTTCTGAAGCTAAAGTTGCTGGTGCAATTGACAAATGGGGCAGAAACGTATTTGAGTATCCACAACCAACATTCCAGAAACTGTTGAAGGAGAACTGCATGGAGCCCTTTTTTGTGTTTCAGGTGTTTTGTGTGGGACTCTGGTGTTTGGATGAGTATTGGTACTATAGTTTGTTCACCCTGTTCATGCTGTTTATGTTTGAGTCAACAATGGCCAAAAGTCGGTTAAAGACTCTAACCGAGCTTAGACGTGTTAGAGTAGATAGCCAGACCATAATGGCGCATAGATGTGGGAAGTGGATAAAACTCTCCGGAACTGATCTTCTACCTGGAGATGTGGTTTCAATTGGACGTTCAACTGGTATAAATGGAGGAGATAAATCTGTACCTGCAGATATGCTTATATTGGCAGGAAATGCTATAGTGAATGAAGCCATTCTCACGGGCGAGTCGACCCCACAATGGAAGGTTGTTTCAATAATTGGAAGGGGAGCTGAGGAGAGATTATCAGCTAAGCGAGATAAAAATCATTTATTATTTGGTGGAACAAAAATATTGCAGCATACCCCGGATAAGAATTTTCCTCTTAAAAGTCCTGATGGTGGGTGTGTGGCAGTTGTTTTGAGAACCGGTTTTGAAACAAGTCAGGGAAAGCTAATGCGAACAATTCTGTTTTCTACAGAAAGGGTTACTGCAAACAGCTGGGAAAGTGGACTTTTCATTTTATTCTTAGTCATATTTGCAGTAATAGCTGCAGGTTATGTACTTAAAAAGGGACTGGAGGATCCTACTAGGAGCAAATACAAACTTTTTCTTAGTTGCTCTCTCATTATTACTTCTGTGATCCCACCTGAGCTGCCAATGGAATTGTCAATTGCTGTCAATACATCCTTGATTGCACTTGCAAGACGAGGAATATTTTGCACGGAGCCTTTCCGAATTCCATTTGCTGGAAAGGTTGATATTTGTTGCTTTGACAAAACTGGAACGTTAACATCAGACGATATGGAGTTCCGTGGAGTTGTTGGGTTGGATGCTGCTATGGATTCTGAAATGGATCTATCCAGAGTACCTTTGCGCACTATGGAAATTCTAGCCTCTTGTCATGCCTTAGTGTTTGTGGACAATAAGCTGGTCGGAGATCCTCTTGAAAAGGCCGCACTTAAGGGAATAGATTGGTCATACAAGTCGGACGAAAAGGCCACGCCAAAAAAGGGAAGTGGTCATGCTGTGCAGATTGTTCAGAGACACCACTTCGCATCCCATTTGAAGCGTATGGCAGTTGTTGTCCGGGTTCAGGAGGAGTTTTTTTCTTTTGTCAAGGGTGCTCCCGAAACTATCCAAGAACGACTAATTGATGTGCCTCAATCATATGTTGAAACATACAAGAAATATACAAGACAAGGATCCCGTGTTTTGGCACTTGCATACAAGTCTATTCCAGATATGACAGTTAGTGAAGCTAGAAGCTTGGATAGGGATATTGTGGAGAGTGACCTTATCTTCGCTGGTTTTGGGGTATTTAACTGTCCGATTAGGGCTGATTCAGCTAAAGTTCTGTCTGAATTAGGAGGATCATCACATGACATGGTTATGATAACTGGTGACCAGGCTTTAACAGCTTGCCATGTTGCTGGCCAAGTGCATATCATATCCAAACCAGCGTTAATTCTTACCCAGAAAAGGGAACGTGGAGGATGTGAGTGGATGTCTCCTGATGAGAAGGAGACAATTCCATACAGTGAGAAAGAGGTTGAAACATTATCAGAGACTCGTGATCTCTGTATTGGAGGTGATAGCATTCAAATGCTACAGGAGACATCTGCCGTTCTAAGAGTTGTTCCATATGTTAAGGTATTTGCCAGAGTTGCTCCTGAGCAAAAAGAACTCATTATGACTACTTTTAAAACGGTGGGGAGGATGACACTTATGTGTGGGGATGGAACAAATGACGTGGGAGCTTTGAAACAAGCTCATGTTGGAGTTGCTCTGTTAAATGCTGTGCCTCCTATTCAAAGTGACCACTCTTCTTCAGAAACATCTAAGGATGAAAAAGCAAAACCTGGCAAAGCAAAGAAAACTAAGTCTGCATTGGATGTAGCCGGAAAGCCCATCAGTCTAAATGGGGAAAGTCCTCCCAAGGGGAAAGTGACTGCGAAGACGGCCGCAGAGATGCAGAGGCAGAAGCTAAAGAAGATGATGGATGAACTAAATGAGGAGGGCGATGGACGTGCAGCTCCCATTGTCAAGCTCGGGGATGCCTCCATGGCTTCTCCATTCACAGCAAAGCATGCCTCAGTCGCTCCTACCACTGACATAATTCGTCAGGGTAGGAGCACTCTTGTGACCACCCTCCAAATGTTCAAAATACTTGGACTCAACTGCCTCGCCACAGCATATGTGCTGAGTGTAATGTATTTGGATGGTGTGAAATTGGGGGACGTTCAAGCCACCATCAGTGGAGTATTCACAGCTGCATTTTTCCTTTTCATCTCACATGCCCGGCCACTTCAAACCCTCTCAGCTGAAAGGCCTCATCCCCATGTCTTTTGCTCCTATGTCTTACTCTCTCTATTGGGTCAGTTTGCAATTCACATAGTTTTCTTGATGTCTTCAGTGAAGGAAGCGGAGAAACACATGCCCGATGAATGCATAGAGCCAGACTCAGAATTTCATCCGAATTTGGTAAACACAGTTTCATACATGGTGAGCATGATGCTTCAAGTGGCCACTTTTGCTGTGAATTACATGGGGCATCCATTCAACCAGAGCATCTCAGAGAACAAGCCATTCCGTTATGCGCTGTTGGGTGCTGTCGTTTTCTTCACAGTCATAACTTCTGACCTGTTTCGAAGTCTGAATGATTGGTTGAAATTGGTTCCTTTGCCTGTGGGATTGAGAGACAAGCTTTTGCTTTGGGCTTTGCTCATGTTTTTGTGCTGCTACTCATGGGAGAGACTCTTGAGATGGGCCTTCCCGGGTAAAATCCCTGCGTGGAAGAAACGACAACGGCTGGCTGCTGCTAATTTAGAGAAGAAGCGAGTCTGA | 3543 | 43.49 | MSRFHVGGKVVERVELLRKKPLAWQLYVWPFAILYVFWLTVVIPSIDFGDATIVLGGLVAFHILVWLFTAWSVDFRCFVQYSKVHDIHHANACKITPAKFSGSKEIVPLHFRKLVIGSSSTVDMEEIYFDFRKQQFIFSNEKETFAKLPYPTKEMFSYYHKSSGHGSEAKVAGAIDKWGRNVFEYPQPTFQKLLKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQTIMAHRCGKWIKLSGTDLLPGDVVSIGRSTGINGGDKSVPADMLILAGNAIVNEAILTGESTPQWKVVSIIGRGAEERLSAKRDKNHLLFGGTKILQHTPDKNFPLKSPDGGCVAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVIFAVIAAGYVLKKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGLDAAMDSEMDLSRVPLRTMEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKATPKKGSGHAVQIVQRHHFASHLKRMAVVVRVQEEFFSFVKGAPETIQERLIDVPQSYVETYKKYTRQGSRVLALAYKSIPDMTVSEARSLDRDIVESDLIFAGFGVFNCPIRADSAKVLSELGGSSHDMVMITGDQALTACHVAGQVHIISKPALILTQKRERGGCEWMSPDEKETIPYSEKEVETLSETRDLCIGGDSIQMLQETSAVLRVVPYVKVFARVAPEQKELIMTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPIQSDHSSSETSKDEKAKPGKAKKTKSALDVAGKPISLNGESPPKGKVTAKTAAEMQRQKLKKMMDELNEEGDGRAAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLQTLSAERPHPHVFCSYVLLSLLGQFAIHIVFLMSSVKEAEKHMPDECIEPDSEFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENKPFRYALLGAVVFFTVITSDLFRSLNDWLKLVPLPVGLRDKLLLWALLMFLCCYSWERLLRWAFPGKIPAWKKRQRLAAANLEKKRV | 1180 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 20620533 | 20650922 | + | Bma023278.1 | Bma06g00464 | 83966 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g00464 | 1180 | PRINTS | P-type cation-transporting ATPase superfamily signature | 691 | 701 | - | - | |
Bma06g00464 | 1180 | PRINTS | P-type cation-transporting ATPase superfamily signature | 810 | 829 | - | - | |
Bma06g00464 | 1180 | PRINTS | P-type cation-transporting ATPase superfamily signature | 489 | 503 | - | - | |
Bma06g00464 | 1180 | PRINTS | P-type cation-transporting ATPase superfamily signature | 308 | 322 | - | - | |
Bma06g00464 | 1180 | Gene3D | - | 670 | 844 | IPR023214 | - | |
Bma06g00464 | 1180 | MobiDBLite | consensus disorder prediction | 836 | 884 | - | - | |
Bma06g00464 | 1180 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 491 | 497 | IPR018303 | - | |
Bma06g00464 | 1180 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 495 | 679 | IPR023299 | GO:0000166 | |
Bma06g00464 | 1180 | SUPERFAMILY | Calcium ATPase, transduction domain A | 255 | 388 | IPR008250 | - | |
Bma06g00464 | 1180 | MobiDBLite | consensus disorder prediction | 842 | 862 | - | - | |
Bma06g00464 | 1180 | Gene3D | - | 503 | 669 | IPR023299 | GO:0000166 | |
Bma06g00464 | 1180 | CDD | P-type_ATPase_cation | 170 | 1096 | - | - | |
Bma06g00464 | 1180 | ProSitePatterns | Hypothetical cof family signature 2. | 810 | 832 | - | - | |
Bma06g00464 | 1180 | SFLD | Haloacid Dehalogenase | 470 | 944 | - | - | |
Bma06g00464 | 1180 | SUPERFAMILY | HAD-like | 484 | 837 | IPR036412 | - | |
Bma06g00464 | 1180 | TIGRFAM | P-ATPase-V: P-type ATPase of unknown pump specificity (type V) | 45 | 1138 | IPR006544 | GO:0006812|GO:0016021|GO:0019829|GO:0140358 | |
Bma06g00464 | 1180 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 150 | 1158 | IPR023298 | - | |
Bma06g00464 | 1180 | PANTHER | CATION-TRANSPORTING ATPASE | 1 | 1172 | - | - | |
Bma06g00464 | 1180 | PANTHER | CATION-TRANSPORTING ATPASE-RELATED | 1 | 1172 | - | - | |
Bma06g00464 | 1180 | Coils | Coil | 885 | 905 | - | - | |
Bma06g00464 | 1180 | Pfam | E1-E2 ATPase | 260 | 469 | - | - | |
Bma06g00464 | 1180 | Gene3D | - | 224 | 389 | - | - | |
Bma06g00464 | 1180 | Pfam | Cation transport ATPase (P-type) | 541 | 615 | - | - | |
Bma06g00464 | 1180 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 404 | 510 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma06g00464 | 1180 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 778 | 829 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma06g00464 | 1180 | SFLD | p-type atpase | 470 | 944 | IPR044492 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g00464 | Bma-Chr6:20620533 | Bma01g02247 | Bma-Chr1:79646522 | 1.69E-19 | dispersed | |
Bma06g00464 | Bma-Chr6:20620533 | Bma04g00144 | Bma-Chr4:1235599 | 1.50E-21 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g00464 | K14950 | - | qsu:112002148 | 2003.79 |