Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00464 ATGTCCCGGTTCCATGTTGGTGGGAAGGTGGTGGAAAGAGTTGAATTGTTGAGGAAGAAGCCCTTGGCCTGGCAGCTGTATGTTTGGCCTTTCGCTATTCTCTATGTTTTCTGGCTAACCGTTGTTATTCCTAGCATAGATTTTGGTGATGCTACTATTGTTCTCGGCGGGCTTGTAGCTTTCCACATTTTGGTCTGGCTTTTTACCGCATGGTCTGTTGATTTCAGATGTTTTGTTCAGTATAGTAAGGTCCATGATATTCATCATGCAAATGCTTGTAAAATAACTCCAGCAAAATTTTCTGGCTCTAAGGAAATTGTTCCGCTTCATTTCCGTAAACTAGTGATAGGTTCTTCATCCACAGTGGATATGGAAGAGATATATTTTGATTTTAGAAAACAACAATTTATCTTCTCAAATGAGAAGGAGACCTTTGCCAAGCTTCCTTATCCGACAAAAGAGATGTTTAGCTATTATCATAAGAGTAGTGGCCACGGTTCTGAAGCTAAAGTTGCTGGTGCAATTGACAAATGGGGCAGAAACGTATTTGAGTATCCACAACCAACATTCCAGAAACTGTTGAAGGAGAACTGCATGGAGCCCTTTTTTGTGTTTCAGGTGTTTTGTGTGGGACTCTGGTGTTTGGATGAGTATTGGTACTATAGTTTGTTCACCCTGTTCATGCTGTTTATGTTTGAGTCAACAATGGCCAAAAGTCGGTTAAAGACTCTAACCGAGCTTAGACGTGTTAGAGTAGATAGCCAGACCATAATGGCGCATAGATGTGGGAAGTGGATAAAACTCTCCGGAACTGATCTTCTACCTGGAGATGTGGTTTCAATTGGACGTTCAACTGGTATAAATGGAGGAGATAAATCTGTACCTGCAGATATGCTTATATTGGCAGGAAATGCTATAGTGAATGAAGCCATTCTCACGGGCGAGTCGACCCCACAATGGAAGGTTGTTTCAATAATTGGAAGGGGAGCTGAGGAGAGATTATCAGCTAAGCGAGATAAAAATCATTTATTATTTGGTGGAACAAAAATATTGCAGCATACCCCGGATAAGAATTTTCCTCTTAAAAGTCCTGATGGTGGGTGTGTGGCAGTTGTTTTGAGAACCGGTTTTGAAACAAGTCAGGGAAAGCTAATGCGAACAATTCTGTTTTCTACAGAAAGGGTTACTGCAAACAGCTGGGAAAGTGGACTTTTCATTTTATTCTTAGTCATATTTGCAGTAATAGCTGCAGGTTATGTACTTAAAAAGGGACTGGAGGATCCTACTAGGAGCAAATACAAACTTTTTCTTAGTTGCTCTCTCATTATTACTTCTGTGATCCCACCTGAGCTGCCAATGGAATTGTCAATTGCTGTCAATACATCCTTGATTGCACTTGCAAGACGAGGAATATTTTGCACGGAGCCTTTCCGAATTCCATTTGCTGGAAAGGTTGATATTTGTTGCTTTGACAAAACTGGAACGTTAACATCAGACGATATGGAGTTCCGTGGAGTTGTTGGGTTGGATGCTGCTATGGATTCTGAAATGGATCTATCCAGAGTACCTTTGCGCACTATGGAAATTCTAGCCTCTTGTCATGCCTTAGTGTTTGTGGACAATAAGCTGGTCGGAGATCCTCTTGAAAAGGCCGCACTTAAGGGAATAGATTGGTCATACAAGTCGGACGAAAAGGCCACGCCAAAAAAGGGAAGTGGTCATGCTGTGCAGATTGTTCAGAGACACCACTTCGCATCCCATTTGAAGCGTATGGCAGTTGTTGTCCGGGTTCAGGAGGAGTTTTTTTCTTTTGTCAAGGGTGCTCCCGAAACTATCCAAGAACGACTAATTGATGTGCCTCAATCATATGTTGAAACATACAAGAAATATACAAGACAAGGATCCCGTGTTTTGGCACTTGCATACAAGTCTATTCCAGATATGACAGTTAGTGAAGCTAGAAGCTTGGATAGGGATATTGTGGAGAGTGACCTTATCTTCGCTGGTTTTGGGGTATTTAACTGTCCGATTAGGGCTGATTCAGCTAAAGTTCTGTCTGAATTAGGAGGATCATCACATGACATGGTTATGATAACTGGTGACCAGGCTTTAACAGCTTGCCATGTTGCTGGCCAAGTGCATATCATATCCAAACCAGCGTTAATTCTTACCCAGAAAAGGGAACGTGGAGGATGTGAGTGGATGTCTCCTGATGAGAAGGAGACAATTCCATACAGTGAGAAAGAGGTTGAAACATTATCAGAGACTCGTGATCTCTGTATTGGAGGTGATAGCATTCAAATGCTACAGGAGACATCTGCCGTTCTAAGAGTTGTTCCATATGTTAAGGTATTTGCCAGAGTTGCTCCTGAGCAAAAAGAACTCATTATGACTACTTTTAAAACGGTGGGGAGGATGACACTTATGTGTGGGGATGGAACAAATGACGTGGGAGCTTTGAAACAAGCTCATGTTGGAGTTGCTCTGTTAAATGCTGTGCCTCCTATTCAAAGTGACCACTCTTCTTCAGAAACATCTAAGGATGAAAAAGCAAAACCTGGCAAAGCAAAGAAAACTAAGTCTGCATTGGATGTAGCCGGAAAGCCCATCAGTCTAAATGGGGAAAGTCCTCCCAAGGGGAAAGTGACTGCGAAGACGGCCGCAGAGATGCAGAGGCAGAAGCTAAAGAAGATGATGGATGAACTAAATGAGGAGGGCGATGGACGTGCAGCTCCCATTGTCAAGCTCGGGGATGCCTCCATGGCTTCTCCATTCACAGCAAAGCATGCCTCAGTCGCTCCTACCACTGACATAATTCGTCAGGGTAGGAGCACTCTTGTGACCACCCTCCAAATGTTCAAAATACTTGGACTCAACTGCCTCGCCACAGCATATGTGCTGAGTGTAATGTATTTGGATGGTGTGAAATTGGGGGACGTTCAAGCCACCATCAGTGGAGTATTCACAGCTGCATTTTTCCTTTTCATCTCACATGCCCGGCCACTTCAAACCCTCTCAGCTGAAAGGCCTCATCCCCATGTCTTTTGCTCCTATGTCTTACTCTCTCTATTGGGTCAGTTTGCAATTCACATAGTTTTCTTGATGTCTTCAGTGAAGGAAGCGGAGAAACACATGCCCGATGAATGCATAGAGCCAGACTCAGAATTTCATCCGAATTTGGTAAACACAGTTTCATACATGGTGAGCATGATGCTTCAAGTGGCCACTTTTGCTGTGAATTACATGGGGCATCCATTCAACCAGAGCATCTCAGAGAACAAGCCATTCCGTTATGCGCTGTTGGGTGCTGTCGTTTTCTTCACAGTCATAACTTCTGACCTGTTTCGAAGTCTGAATGATTGGTTGAAATTGGTTCCTTTGCCTGTGGGATTGAGAGACAAGCTTTTGCTTTGGGCTTTGCTCATGTTTTTGTGCTGCTACTCATGGGAGAGACTCTTGAGATGGGCCTTCCCGGGTAAAATCCCTGCGTGGAAGAAACGACAACGGCTGGCTGCTGCTAATTTAGAGAAGAAGCGAGTCTGA 3543 43.49 MSRFHVGGKVVERVELLRKKPLAWQLYVWPFAILYVFWLTVVIPSIDFGDATIVLGGLVAFHILVWLFTAWSVDFRCFVQYSKVHDIHHANACKITPAKFSGSKEIVPLHFRKLVIGSSSTVDMEEIYFDFRKQQFIFSNEKETFAKLPYPTKEMFSYYHKSSGHGSEAKVAGAIDKWGRNVFEYPQPTFQKLLKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQTIMAHRCGKWIKLSGTDLLPGDVVSIGRSTGINGGDKSVPADMLILAGNAIVNEAILTGESTPQWKVVSIIGRGAEERLSAKRDKNHLLFGGTKILQHTPDKNFPLKSPDGGCVAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVIFAVIAAGYVLKKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGLDAAMDSEMDLSRVPLRTMEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKATPKKGSGHAVQIVQRHHFASHLKRMAVVVRVQEEFFSFVKGAPETIQERLIDVPQSYVETYKKYTRQGSRVLALAYKSIPDMTVSEARSLDRDIVESDLIFAGFGVFNCPIRADSAKVLSELGGSSHDMVMITGDQALTACHVAGQVHIISKPALILTQKRERGGCEWMSPDEKETIPYSEKEVETLSETRDLCIGGDSIQMLQETSAVLRVVPYVKVFARVAPEQKELIMTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPIQSDHSSSETSKDEKAKPGKAKKTKSALDVAGKPISLNGESPPKGKVTAKTAAEMQRQKLKKMMDELNEEGDGRAAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLQTLSAERPHPHVFCSYVLLSLLGQFAIHIVFLMSSVKEAEKHMPDECIEPDSEFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENKPFRYALLGAVVFFTVITSDLFRSLNDWLKLVPLPVGLRDKLLLWALLMFLCCYSWERLLRWAFPGKIPAWKKRQRLAAANLEKKRV 1180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20620533 20650922 + Bma023278.1 Bma06g00464 83966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00464 1180 PRINTS P-type cation-transporting ATPase superfamily signature 691 701 - -
Bma06g00464 1180 PRINTS P-type cation-transporting ATPase superfamily signature 810 829 - -
Bma06g00464 1180 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Bma06g00464 1180 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Bma06g00464 1180 Gene3D - 670 844 IPR023214 -
Bma06g00464 1180 MobiDBLite consensus disorder prediction 836 884 - -
Bma06g00464 1180 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Bma06g00464 1180 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 495 679 IPR023299 GO:0000166
Bma06g00464 1180 SUPERFAMILY Calcium ATPase, transduction domain A 255 388 IPR008250 -
Bma06g00464 1180 MobiDBLite consensus disorder prediction 842 862 - -
Bma06g00464 1180 Gene3D - 503 669 IPR023299 GO:0000166
Bma06g00464 1180 CDD P-type_ATPase_cation 170 1096 - -
Bma06g00464 1180 ProSitePatterns Hypothetical cof family signature 2. 810 832 - -
Bma06g00464 1180 SFLD Haloacid Dehalogenase 470 944 - -
Bma06g00464 1180 SUPERFAMILY HAD-like 484 837 IPR036412 -
Bma06g00464 1180 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 45 1138 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Bma06g00464 1180 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 1158 IPR023298 -
Bma06g00464 1180 PANTHER CATION-TRANSPORTING ATPASE 1 1172 - -
Bma06g00464 1180 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1172 - -
Bma06g00464 1180 Coils Coil 885 905 - -
Bma06g00464 1180 Pfam E1-E2 ATPase 260 469 - -
Bma06g00464 1180 Gene3D - 224 389 - -
Bma06g00464 1180 Pfam Cation transport ATPase (P-type) 541 615 - -
Bma06g00464 1180 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 404 510 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00464 1180 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 778 829 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g00464 1180 SFLD p-type atpase 470 944 IPR044492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00464 Bma-Chr6:20620533 Bma01g02247 Bma-Chr1:79646522 1.69E-19 dispersed
Bma06g00464 Bma-Chr6:20620533 Bma04g00144 Bma-Chr4:1235599 1.50E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00464 K14950 - qsu:112002148 2003.79