Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00492 ATGGAAGGCGCTCTCTCTCTCTTCCCTCATCTCTGCCTTGGCCACAGCTCATTGGGAAGAATAAATAGAGGAAGATATTACACTTTCTCACCATCCAAACGCCTCCAAGAAAAATTCTCCATTGGTCGAACCAACCTTCGGATCTGCAACCCTCCTCTGCTATCATTTTCTTCGTACGGGCGGTGTGCGACAGGATTAGCAATGTCGGAAGTAGAATCAAGGGAGAAAGCAGCGGAGTTTGGAGAGTTGGAAGCAGGTTTGCTGGTGGAAGAGCTGAGAAAGAGGTACAGGAGCGGAGTAACGAAGAGCTACGAATGGAGAATGTTGCAGCTGAAGAGGATAGAGACGATGCTTCATGACAAGGAAGAAGACATTTTAGAAGCTCTTTCTGCTGACCTCTCCAAGCCTCACCTTGAGGCCTTCGCCTCCGAGATTTCAATGCTAAGATCCTCGTGTAAGTTGGCTCTAAAAGAGCTCAAAAACTGGATGAAGCCAAAAAAGGTGAAAACTTCGATTTCATCGTTTCCTTCTTCAGCAGAGATAGTGTCTGAACCTCTAGGAGTAGTGCTGATCATCTCTGCATGGAACTTTCCCTTCTTGTTGTCGATCGACCCCGTGATCGGAGCAATAGCAGCAGGGAACTGTGTGGTGTTGAAGCCGTCAGAGTTGGCTCCGAGGTCATCGTTTCTCATGACAAAACTGTTTGAGGAGTATTTGGATAACTCTTCCATAAGAGTAGTTGAGGGTGCTGTTTCAGAAACCTCTGCTTTGCTCCATCAGAAATGGGATAAGATTTTTTATACAGGAGGGGCAAGAGTGGCACAGATTGTGATGACTGCAGCCGCAAAGCACCTTACACCCGTGGTCTTAGAACTGGGTGGTAAGTGCCCAGCTGTTGTCGATTCTGACATCAATTTACAAGTGGCAACTAGGAGAATAATAGGAGGAAAGTGGGCGTGTAACAATGGGCAGGCTTGCGTTGGGGTGGACCACATCATCACTACAAAGGATTTTGCTCCCAAATTGATTGATGCGCTTAAGCACAAGTTAGAAAAGTGGTACGGAAAAGATGCGATGGAATCAGATGATATCTCACGGATTGTGTCCTCGACTCACTTCTCACGCTTGCTAGCGTTTCTGGAGGAGGACGGAATCTCTCAGAAAATTGTTTTCGGAGGCCAGACCGTCAAGGACAAATTGTCGGTGTCAAAATATGGATGTTACTTTTTTTTTTTATCATATCAATACAATGAATTTGTCTTTTCGACTGCTAGTTTTTCATCCCACAAGGACTTCCACGTAATCTTTGTGATCGTTCTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGA 1353 44.86 MEGALSLFPHLCLGHSSLGRINRGRYYTFSPSKRLQEKFSIGRTNLRICNPPLLSFSSYGRCATGLAMSEVESREKAAEFGELEAGLLVEELRKRYRSGVTKSYEWRMLQLKRIETMLHDKEEDILEALSADLSKPHLEAFASEISMLRSSCKLALKELKNWMKPKKVKTSISSFPSSAEIVSEPLGVVLIISAWNFPFLLSIDPVIGAIAAGNCVVLKPSELAPRSSFLMTKLFEEYLDNSSIRVVEGAVSETSALLHQKWDKIFYTGGARVAQIVMTAAAKHLTPVVLELGGKCPAVVDSDINLQVATRRIIGGKWACNNGQACVGVDHIITTKDFAPKLIDALKHKLEKWYGKDAMESDDISRIVSSTHFSRLLAFLEEDGISQKIVFGGQTVKDKLSVSKYGCYFFFLSYQYNEFVFSTASFSSHKDFHVIFVIVLRFFFFFFFFL 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23112798 23116146 - Bma023338.1 Bma06g00492 83994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00492 450 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 294 399 IPR016163 GO:0016620
Bma06g00492 450 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 319 330 IPR016160 GO:0016491
Bma06g00492 450 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 93 293 IPR016162 GO:0016491
Bma06g00492 450 PANTHER ALDEHYDE DEHYDROGENASE 55 403 IPR012394 GO:0006081
Bma06g00492 450 SUPERFAMILY ALDH-like 87 399 IPR016161 GO:0016491
Bma06g00492 450 Pfam Aldehyde dehydrogenase family 106 395 IPR015590 GO:0016491
Bma06g00492 450 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 55 403 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00492 Bma-Chr6:23112798 Bma07g00256 Bma-Chr7:3200181 5.99E-94 dispersed
Bma06g00492 Bma-Chr6:23112798 Bma11g00290 Bma-Chr11:2726018 6.06E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00492 K00128 - jre:108983383 465.307