Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00495 TGTTATTTAGGACTACAGTTTGAGAACTCATGTGAAATTGGTGTATTTTCTAAGCTCACAAATGCTTACTGTTTGGTTGCCATTGGTGGCTCGGAGAACTTCTACAGTACTTTTGAAGCTGAATTAGCAGATGTGATTCCTGTTGTTAAGACCTCTATTGGAGGCACTCGTATTATTGGTCGCCTCTGTGCTGGTAACAAAAATGGGCTTCTTGTGCCCCATACAACCACTGATCAAGAACTTCAGCATTTGAGGAACAGTCTACCTGATCAAGTGGTTGTTCAGCGCATAGATGAGAGGCTATCAGCTCTGGGAAATTGTATCGCATGCAATGACCATGTTGCTCTGACCCACACTGATCTTGACAGGGAAACTGAGGAAATGATTGCAGATGTTCTTGGAGTAGAAGTATTTAGGCAGAGTGTAGCTGGTAATATCCTTGTGGGAAGTTACTGTGTCTTTTCTAACACGGGTGGCCTGGTACATCCCCATACCTCGATTGAAGATTTGGATGAACTCTCAACGCTTCTTCAAGTCCCCTTGGTGGCAGGCACTGTGAACCGTGGTAGTGAAGTTATTGCCGCTGGCATTACAGTGAATGACTGGACTGCATTTTGCGGATCCGACACTACAGCAACTGAGCTCTCAGTCATAGAGAGCGTTTTCAAGTTGAGAGAGGCTCAACCAAGCGCAATAGCCGACGAGATGAGAAAATCTCTCATCGACAGTTACGTA 735 45.03 CYLGLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQSVAGNILVGSYCVFSNTGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGITVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIADEMRKSLIDSYV 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23638558 23644457 + Bma031285 Bma06g00495 83997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00495 245 PIRSF Transl_init_IF-6 2 226 IPR002769 GO:0042256|GO:0043022
Bma06g00495 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 5 245 IPR002769 GO:0042256|GO:0043022
Bma06g00495 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Bma06g00495 245 CDD IF6 5 223 IPR002769 GO:0042256|GO:0043022
Bma06g00495 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 5 245 - -
Bma06g00495 245 Pfam eIF-6 family 5 203 IPR002769 GO:0042256|GO:0043022
Bma06g00495 245 SUPERFAMILY Pentein 5 224 - -
Bma06g00495 245 TIGRFAM eIF-6: putative translation initiation factor eIF-6 6 224 IPR002769 GO:0042256|GO:0043022
Bma06g00495 245 Gene3D - 3 225 - -
Bma06g00495 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01017 Bma06g00495 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01017 Bma-Chr3:11287455 Bma06g00495 Bma-Chr6:23638558 8.29E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00495 K03264 - han:110895539 460.685