Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00531 ATGGCCAAATCGCCGGAGCAAGAACACCCACAAAAGGCTTTTGGTTGGGCTGCCACCGATTCTTCTGGTCTTTTCTCTCCCTTTCATTTTTCCAGAAGGGAGAATGGAGAGGACGACGTCACTGTGAAGGTTCTTTATTGTGGGGTTTGCCATTCTGATCTACACTTTGTTAAGAATGAGATGGGCATCTCAGATTATCCTCTTGTTCCTGGGCATGAAATCACGGGTATCATAACGAATCTCGGAAGCAACGTGAAGAAATTCAAAGTGGGCGATCGAGTCGGAGTTGGCGTGATAATAGGGTCTTGTAGGAGCTGTGAAAAATGCGACGAGGACTTGGAAAACTACTGCCCGGAAGTGATTTTTACATATAACTCACACTATTATGATGGATCGAAAAACTATGGGGGTTATTCTGATATAATTGTGGTGGATCAGCATTTTGTGCTTCAATTTCCTGACAAGCTACCTCTTGATGTGGGTGCTCCTCTTCTTTGTGCTGGAATTTCAGTGTACAGCCCAATGAAATACTATGGAATGACAGAGGCAGGCAAGCATTTGGGTGTGGTTGGGCTTGGTGGACTTGGTCATGTTGCTGTCAAACTTGGGAAGGCATTTGGGTTGAAAGTTACAGTCGTCAGTACCTCTCCCTCTAAGGAAGATGATGCTATTAACAAACTTGGAGCTGATTCGTTTCTTCTCTCCACTGACCCTCTCAAAATCAAGGCAAGCTGCATGGATTTTATAATTGACACGGTGGCTGCTGTTCATTCCCTTGCTCCTCTGCTTGGTTTGTTGAAGATAAATGGAAAGCTCATAACTGTGGGTATGCCCATCCAGCCTCTTGAGCTCCCAATCATTCCCCTTGTTTTGGGAAGGAAGATGGTGGGGGGCAGCGACATCGGAGGAGTAAAAGAGACGCAAGAAATGCTAAACTTCTGTGCAAAACACAGTATCTCACCAGATATCGAATTGATTCAGATCGATGAAATCAACACGGCATTCGAGAGGCTTGCCAAATCGGACGTCAGGTTTCGGTTTGTCATCGATGTGGCAAACTCGTTAAAAACTTGA 1074 45.16 MAKSPEQEHPQKAFGWAATDSSGLFSPFHFSRRENGEDDVTVKVLYCGVCHSDLHFVKNEMGISDYPLVPGHEITGIITNLGSNVKKFKVGDRVGVGVIIGSCRSCEKCDEDLENYCPEVIFTYNSHYYDGSKNYGGYSDIIVVDQHFVLQFPDKLPLDVGAPLLCAGISVYSPMKYYGMTEAGKHLGVVGLGGLGHVAVKLGKAFGLKVTVVSTSPSKEDDAINKLGADSFLLSTDPLKIKASCMDFIIDTVAAVHSLAPLLGLLKINGKLITVGMPIQPLELPIIPLVLGRKMVGGSDIGGVKETQEMLNFCAKHSISPDIELIQIDEINTAFERLAKSDVRFRFVIDVANSLKT 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27263080 27267287 + Bma023412.1 Bma06g00531 84033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00531 357 PANTHER ALDEHYDE REDUCTASE 11 355 - -
Bma06g00531 357 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Bma06g00531 357 CDD CAD1 14 350 - -
Bma06g00531 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Bma06g00531 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 11 355 - -
Bma06g00531 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 319 IPR036291 -
Bma06g00531 357 SMART PKS_ER_names_mod 23 349 IPR020843 GO:0016491
Bma06g00531 357 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Bma06g00531 357 Gene3D - 16 351 - -
Bma06g00531 357 SUPERFAMILY GroES-like 9 199 IPR011032 -
Bma06g00531 357 Gene3D - 167 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00184 Bma-Chr5:5157125 Bma06g00531 Bma-Chr6:27263080 2.21E-131 dispersed
Bma06g00315 Bma-Chr6:5280906 Bma06g00531 Bma-Chr6:27263080 1.45E-161 dispersed
Bma06g00531 Bma-Chr6:27263080 Bma06g00655 Bma-Chr6:35204886 8.62E-153 dispersed
Bma03g01039 Bma-Chr3:12141113 Bma06g00531 Bma-Chr6:27263080 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00531 K00083 - vvi:100245522 551.592