Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g00570 | ATGGAGTCATTGTCCGGCTTGGTGTTGCCGGATATTAGTGGAATAAATGGAAATGCTGACCCTCCCAATGCTGACCCTGAGTTTGCTGAGAAAGATCCAACTGGTCGATATGTCCGGTACAATGAAATCTTGGGCAAAGGTGCTTTCAAGACTGTTTATAAGGCATTCGATGAAGTCGATGGCATTGAAGTTGCTTGGAACCAAGTGAGAATTGATGTTGTTTTACAGTCACCTGAAGATTTGGAAAAATTGTATTCTGAAGTGCACTTGCTAAAGTCGGTGAAACATGAGAATGTCATTAAGTTCTTTAGTTCTTGGGTGGATGATAAGAAGAAAACTGTCAATATGATTACCGAGCTCTTCACATCGGGGAGTCTACGACAATATCGGAAGAAGCATAAGAACGTTGACATGAAAGCAATAAAGAATTGGGCGAGGCAAATTCTTAAGGGTTTGGTCTACCTTCATAGTCATACTCCTCCAATTATTCACAGAGACTTGAAATGCGACAATATTTTCGTAAATGGGAACCACGGACAAGTAAAAATTGGAGATCTCGGATTGGCGATTGTCATGCAACAGCCCACAGCTCGGAGTGTCATTGGAACGCCTGAATTTATGGCTCCTGAACTTTACGAGGAGGAATACAACGAACTTGTGGATATATATTCTTTCGGAATGTGTATGCTGGAGATGGTAACTTTCGATTATCCATACAGCGAATGCAAAAATCCAGCTCAAATTTTTAAGAAGGTTACCTCTGGAATTAAACCTGCTTCCCTTTATAATGTTTCTGATCCCGAAATTAAGGAGTTCATTGAGAAATGTCTGGTTCCAGCACAGGAGAGATTATCTGCAACAGAGCTTCTCGAAGATCCATTCCTTCGGATTGAGAGCCCAAAGGAGCCAATACGCGATCCTTTACAGTTACCAAACCACAATCTCAATGCATTAAATGTACCAAAGTCTGGGCCGCTTTCAATGGACATAGATATTGATGATAGGCAACTTTCTTTAAGCGCTTGTACAGGAAGCAACAATGGCAGCCCATATTGTCCAGCTTTGGAATTTTATAGAATGCATAACAGCAATGAATTTAGACTGAGAGGGAAGAAAAATGATGAGAATTCAGTTTCATTGAACTTGCGCATCGCGGACTTACGAGGTCGAGTGAGGAATATACATTTTTTGTTTTACCTTGATTCTGATACTGCACTTTCTGTGGCTGCTGAGATGGTGGAGCATTTGGAACTAGCAGACCATGATGTAGCTTTCATTGCTGAGTTTATTGATTACTTGATCATGAAACTTATACCTTGGTGGAAGCCTTTATCTGGTTATTTCACAAATAGGGAAACAAGTTCTTGTGGTGGATCTCCTCTCCATAACAATGGAAAATCCTCTACTGCTTGTCTATGGGAATCGATGTTGACTGGCATTCCTTCAGAGCTCGTCGATGAGCAAGATTCGTTCTCTGGGTTGATAAATCCCGACAAAAATTCTATGCAGGATGAGGATGTCAGCTGGTCCAACAACCCTACTGGCTCCATTTTTAAAGGTGAACGCAGTCCTCCAATTCTCGATAATTTTGAAGATCAACACTCACATGCATCTGCTGGTTCCGAGATTGTTGTTGAAGACGACTCTACCAAAAACGATAAAGCGGAGGAGTTTGATTCAAATCTTGAAGGAAATTCTAAAGGGTCTAGTTGGTATGCATTGGAACTGGGGATCGGAGATTCTTTCTTCGGCGACTGCAAATCAGAGAGAAATGCGAACGACACGGGGGTATCGTCCCCGACTAATGAATCTGCAAAGAATTTGGAATTGTCATTTCACGACATTTGCGGAACTTCGAACGTAATGAGCTTGACGAGTAGTTGTTCCTCGTTATCCATAGCTGACAAAGATGTGGATGGTGATCTGAAGTTGGAGCTTGAAGCCATAGAAGCGCAGTACCAGCAATGGTTTCAAGAACTCGGTAGAATGAAGGAAGAAGCATTGGAAGCGACGAGGAAGAGATGGACGGCGAAGAAGAAACTCACCGTTCAATGA | 2055 | 42.04 | MESLSGLVLPDISGINGNADPPNADPEFAEKDPTGRYVRYNEILGKGAFKTVYKAFDEVDGIEVAWNQVRIDVVLQSPEDLEKLYSEVHLLKSVKHENVIKFFSSWVDDKKKTVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILKGLVYLHSHTPPIIHRDLKCDNIFVNGNHGQVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVTFDYPYSECKNPAQIFKKVTSGIKPASLYNVSDPEIKEFIEKCLVPAQERLSATELLEDPFLRIESPKEPIRDPLQLPNHNLNALNVPKSGPLSMDIDIDDRQLSLSACTGSNNGSPYCPALEFYRMHNSNEFRLRGKKNDENSVSLNLRIADLRGRVRNIHFLFYLDSDTALSVAAEMVEHLELADHDVAFIAEFIDYLIMKLIPWWKPLSGYFTNRETSSCGGSPLHNNGKSSTACLWESMLTGIPSELVDEQDSFSGLINPDKNSMQDEDVSWSNNPTGSIFKGERSPPILDNFEDQHSHASAGSEIVVEDDSTKNDKAEEFDSNLEGNSKGSSWYALELGIGDSFFGDCKSERNANDTGVSSPTNESAKNLELSFHDICGTSNVMSLTSSCSSLSIADKDVDGDLKLELEAIEAQYQQWFQELGRMKEEALEATRKRWTAKKKLTVQ | 684 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 30651802 | 30655270 | - | Bma023480.1 | Bma06g00570 | 84072 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g00570 | 684 | MobiDBLite | consensus disorder prediction | 546 | 561 | - | - | |
Bma06g00570 | 684 | Gene3D | Transferase(Phosphotransferase) domain 1 | 121 | 299 | - | - | |
Bma06g00570 | 684 | MobiDBLite | consensus disorder prediction | 493 | 518 | - | - | |
Bma06g00570 | 684 | Gene3D | Phosphorylase Kinase; domain 1 | 23 | 119 | - | - | |
Bma06g00570 | 684 | Coils | Coil | 646 | 666 | - | - | |
Bma06g00570 | 684 | PANTHER | KINASE DOMAIN PROTEIN | 6 | 684 | - | - | |
Bma06g00570 | 684 | SUPERFAMILY | Protein kinase-like (PK-like) | 40 | 296 | IPR011009 | - | |
Bma06g00570 | 684 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 6 | 684 | - | - | |
Bma06g00570 | 684 | Gene3D | - | 376 | 442 | - | - | |
Bma06g00570 | 684 | MobiDBLite | consensus disorder prediction | 491 | 563 | - | - | |
Bma06g00570 | 684 | CDD | STKc_WNK | 36 | 295 | - | - | |
Bma06g00570 | 684 | Pfam | Protein kinase domain | 41 | 295 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g00570 | 684 | ProSiteProfiles | Protein kinase domain profile. | 38 | 295 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g00570 | 684 | MobiDBLite | consensus disorder prediction | 12 | 31 | - | - | |
Bma06g00570 | 684 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 162 | 174 | IPR008271 | GO:0004672|GO:0006468 | |
Bma06g00570 | 684 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 379 | 433 | IPR024678 | GO:0004674|GO:0005524 | |
Bma06g00570 | 684 | SMART | serkin_6 | 38 | 295 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01110 | Bma-Chr2:52807160 | Bma06g00570 | Bma-Chr6:30651802 | 0 | dispersed | |
Bma03g00765 | Bma-Chr3:7005179 | Bma06g00570 | Bma-Chr6:30651802 | 7.76E-160 | dispersed | |
Bma06g00570 | Bma-Chr6:30651802 | Bma09g00404 | Bma-Chr9:34113175 | 0 | dispersed | |
Bma06g00570 | Bma-Chr6:30651802 | Bma06g00573 | Bma-Chr6:30802840 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66539 | PF00069 | Pkinase | 2.30E-53 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g00570 | K08867 | - | jre:108986606 | 931.013 |