Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00573 ATGGAGTCATTGTCCGGCTTGGTGTTGCCGGATATTAGTGGAATAAATGGAAATGCTGACCCTCCCAATGCTGACCCTGAGTTTGCTGAGAAAGATCCAACTGGTCGATATGTCCGGTACAATGAAATCTTGGGCAAAGGTGCTTTCAAGACTGTTTATAAGGCATTCGATGAAGTCGATGGCATTGAAGTTGCTTGGAACCAAGTGAGAATTGATGTTGTTTTACAGTCACCTGAAGATTTGGAAAAATTGTATTCTGAAGTGCACTTGCTAAAGTCGGTGAAACATGAGAATGTCATTAAGTTCTTTAGTTCTTGGGTGGATGATAAGAAGAAAACTGTCAATATGATTACCGAGCTCTTCACATCGGGGAGTCTACGACAATATCGGAAGAAGCATAAGAACGTTGACATGAAAGCAATAAAGAATTGGGCGAGGCAAATTCTTAAGGGTTTGGTCTACCTTCATAGTCATACTCCTCCAATTATTCACAGAGACTTGAAATGCGACAATATTTTCGTAAATGGGAACCACGGACAAGTAAAAATTGGAGATCTCGGATTGGCGATTGTCATGCAACAGCCCACAGCTCGGAGTGTCATTGGAACGCCTGAATTTATGGCTCCTGAACTTTACGAGGAGGAATACAACGAACTTGTGGATATATATTCTTTCGGAATGTGTATGCTGGAGATGGTAACTTTCGATTATCCATACAGCGAATGCAAAAATCCAGCTCAAATTTTTAAGAAGGTTACCTCTGGAATTAAACCTGCTTCCCTTTATAATGTTTCTGATCCCGAAATTAAGGAGTTCATTGAGAAATGTCTGGTTCCAGCACAGGAGAGACTATCTGCAACAGAGCTTCTCGAAGATCCATTCCTTCGGATTGAGAGCCCAAAGGAGCCAATACGCGATCCTTTACAGTTACCAAACCACAATCTCAATGCATTAAATGTACCAAAGTCTGGGCCGCTTTCAATGGACATAGATATTGATGATAGGCAACTTTCTTTAAGCGCTTGTACAGGAAGCAACAATGGCAGCCCATATTGTCCAGCTTTGGAATTTTATAGAATGCATAACAGCAATGAATTTAGACTGAGAGGGAAGAAAAATGATGAGAATTCAGTTTCATTGAACTTGCGCATCGCGGACTTACGAGGTCGAGTGAGGAATATACATTTTTTGTTTTACCTTGATTCTGATACTGCACTTTCTGTGGCTGCTGAGATGGTGGAGCATTTGGAACTAGCAGACCATGATGTAGCTTTCATTGCTGAGTTTATTGATTACTTGATCATGAAACTTATACCTTGGTGGAAGCCTTTATCTGGTTATTTCGCAAATAGGGAAACAAGTTCATGTGGTGGATCTCCTCTCCATAACAATGGAAAATCCTCTACTGCTTGTCTATGGGAATCGATGTTGACTGGCATTCCTTCAGAGCTCGTTGATGAGCAAGATTCGTTCTCTGGGTTGATAAATCCCGACAAAAATTCTATGCAGGATGAGGATGTCAGCTGGTCCAACAACCCTACTGGCTCCATTTTTAAAGGTGAACGCAGTCCTCCAATTCTCGATAATTTTGAAGATCAACACTCACATGCATCTGCTGGTTCTGAGATTGTTGTTGAAGCCGACTCTACCAAAAACGATAAAGCGGAGGAGTTTGATTCAAATCTTGAAGGAAATTCAAAAGGGTCTAGTTGGTATGCATTGGAACTGGGGCTCGGAGATTCTTTCTTCGGCGACTGCAAATCAGAGAGAAATGCGAATGACACGGGGGTATCGTCCCCGACAAATGAATCTGCAAAGAATTTGGAATTGTCATTTCACGACATTTGCGGAACTTCGAACGTAATGAGCTTGACGAGTAGTTGTTCCTCGTTATCCATAGCTGACAAAGATGTGGATGGTGATCTGAAGTTGGAGCTTGAAGCCATAGAAGCGCAGTACCAGCAATGGTTTCAAGAACTCGGTAGAATGAAGGAAGAAGCATTGGAAGCGACGAGGAAGAGATGGACGGCGAAGAAGAAACTCACCGTTCAATGA 2055 42.09 MESLSGLVLPDISGINGNADPPNADPEFAEKDPTGRYVRYNEILGKGAFKTVYKAFDEVDGIEVAWNQVRIDVVLQSPEDLEKLYSEVHLLKSVKHENVIKFFSSWVDDKKKTVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILKGLVYLHSHTPPIIHRDLKCDNIFVNGNHGQVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVTFDYPYSECKNPAQIFKKVTSGIKPASLYNVSDPEIKEFIEKCLVPAQERLSATELLEDPFLRIESPKEPIRDPLQLPNHNLNALNVPKSGPLSMDIDIDDRQLSLSACTGSNNGSPYCPALEFYRMHNSNEFRLRGKKNDENSVSLNLRIADLRGRVRNIHFLFYLDSDTALSVAAEMVEHLELADHDVAFIAEFIDYLIMKLIPWWKPLSGYFANRETSSCGGSPLHNNGKSSTACLWESMLTGIPSELVDEQDSFSGLINPDKNSMQDEDVSWSNNPTGSIFKGERSPPILDNFEDQHSHASAGSEIVVEADSTKNDKAEEFDSNLEGNSKGSSWYALELGLGDSFFGDCKSERNANDTGVSSPTNESAKNLELSFHDICGTSNVMSLTSSCSSLSIADKDVDGDLKLELEAIEAQYQQWFQELGRMKEEALEATRKRWTAKKKLTVQ 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30802840 30806303 - Bma023486.1 Bma06g00573 84075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00573 684 Gene3D Transferase(Phosphotransferase) domain 1 121 299 - -
Bma06g00573 684 SUPERFAMILY Protein kinase-like (PK-like) 40 296 IPR011009 -
Bma06g00573 684 Gene3D Phosphorylase Kinase; domain 1 23 119 - -
Bma06g00573 684 Coils Coil 646 666 - -
Bma06g00573 684 PANTHER KINASE DOMAIN PROTEIN 6 684 - -
Bma06g00573 684 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 684 - -
Bma06g00573 684 Gene3D - 376 442 - -
Bma06g00573 684 CDD STKc_WNK 36 295 - -
Bma06g00573 684 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00573 684 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00573 684 MobiDBLite consensus disorder prediction 12 31 - -
Bma06g00573 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Bma06g00573 684 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 379 433 IPR024678 GO:0004674|GO:0005524
Bma06g00573 684 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00573 Bma-Chr6:30802840 Bma09g00404 Bma-Chr9:34113175 0 dispersed
Bma06g00570 Bma-Chr6:30651802 Bma06g00573 Bma-Chr6:30802840 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66540 PF00069 Pkinase 2.30E-53 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00573 K08867 - jre:108986606 934.095