Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00585 ATGCAATCCATCGGATCAGTAGACGTTAAAAGACGAGAAGATAAGTCATCACCAACTCCATCATCCTCATCAACCAACTCTTTTATAAAAATCAATCTGCGGATTGATCTTCTTACCTTCACACCGGAATCCATGGAAAGACATACGCCGTCGCTCTTCGACGCCTTCATCTTCTTCTTTTTTCTCTGCTTCTGTTTCTTTCTCTCGAGAAAATGGATCCTCCGTCACAGTATCTCGTTCAAGTTGCCGCCTTCTCCCCCGAGCCTCCCCATCATCGGCCACCTTCACCTCCTCACTGACATGCCCCATCACTCCTTCGCAAAACTCTCCCAAAAACTCGGCCCCATTATCCACCTCCAACTCGGCCGAGTCACCACCATTGTTGTATCGTCTGCGCGACTGGCCAAGCTCGTTCTAAAGACCCACGACCACGTTTTTTCCAACCGCCCTCAACTCCTTTCCGCTGAGTATCTTTCCTTCGGGTGTTCCGACGTTACTTTCTCTCCCTACGGCCCTTACTGGCGCCAACTCAGGAAGATCTACGTCACTGAGTTGCTGAGCTCGCAGCGAGTGAAGTCTTTCCAGCTGATAAGGGCAGAGGAGATAAGTAGGATGCTGAAGTCACTGTCGGCGGAGTGCGGGCGGGAGGTGGACATGAGCAGGCTGTTTTTCAGCTTGGCGAACGATGTACTTTGCAGAGTTGCTTTTGGGAGGAGATTCATGGAGGAAAGGGCGGGAGGAGAGAGGAGAAAGGGTGATTTAGAGGAGGTACTGAGTGAAACCCAGGCTTTGTTTGCTGGGTTTTGCTTGGGAGACTTCTTCCCCGAGTGGGAGTGGGTTAACTGGGTGACTGGGTATAGACGTAGGTTGGAGAGGAACCTGGAAGATCTGAGAGCAGTATGCGATGAAATCATTGATCAACATGTGAGGAAGGAGAGAAGCAGCAATGGCGATGATGGGAGAGAGGACGTTGTGGACGTGCTGCTTAGAGTGCAACAGCGAGACGACTTGGAGGTGCCCATTACTGATGATAACCTCAAAGCAGTTGTCTTGGACATGTTTGTGGCTGGAACGGACACAACATCAGCAACCCTAGAATGGGCAATGACAGAGTTAGCAAGGCATCCAAGAGTGATGATGAAAGCACAGCAAGAAATTAGAAAAATTGCTTCCACCTCAGACGAAGACCATCTTGAACACCTTCATTACATCAGAGACGTCATCAAGGAGACGATGAGACTGCACCCTCCTGTTCCTCTTCTAGTTCCTCGAGAATCAACCGAAAAATGCAGTCTCGATGGGTACGAGATTCCGGCAAAGTCCAGAATTCTCATCAACAGCTACGCCATAGGAAGAGATCCAGAGCTTTGGGAAAACCCTTTGGAGTTCTTGCCTGAAAGGTTTGAGACAGAAGCCAAGGATCAGGATTTCAAGTTTCTACCGTTCGGCGGAGGGAGGAGAGGCTGCCCTGGCTATTCTTTTGCATTGGCGACTCTGGAGACTGCTCTGGCTCGACTGTTGTATCACTTTGACTGGGAGTTGCCAGAAGGAGTTCTTGGAGATGATGTAGACCTGAGTGAGATTTTCGGGCTTGCTACCAGAAAGAAATCGGCACTAATACTCGTCCCAACAGCTAACAACGATTATCAGTTCAAGGACTAA 1662 49.52 MQSIGSVDVKRREDKSSPTPSSSSTNSFIKINLRIDLLTFTPESMERHTPSLFDAFIFFFFLCFCFFLSRKWILRHSISFKLPPSPPSLPIIGHLHLLTDMPHHSFAKLSQKLGPIIHLQLGRVTTIVVSSARLAKLVLKTHDHVFSNRPQLLSAEYLSFGCSDVTFSPYGPYWRQLRKIYVTELLSSQRVKSFQLIRAEEISRMLKSLSAECGREVDMSRLFFSLANDVLCRVAFGRRFMEERAGGERRKGDLEEVLSETQALFAGFCLGDFFPEWEWVNWVTGYRRRLERNLEDLRAVCDEIIDQHVRKERSSNGDDGREDVVDVLLRVQQRDDLEVPITDDNLKAVVLDMFVAGTDTTSATLEWAMTELARHPRVMMKAQQEIRKIASTSDEDHLEHLHYIRDVIKETMRLHPPVPLLVPRESTEKCSLDGYEIPAKSRILINSYAIGRDPELWENPLEFLPERFETEAKDQDFKFLPFGGGRRGCPGYSFALATLETALARLLYHFDWELPEGVLGDDVDLSEIFGLATRKKSALILVPTANNDYQFKD 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31235023 31236892 - Bma023509.1 Bma06g00585 84087

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00585 553 Pfam Cytochrome P450 83 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS E-class P450 group I signature 479 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS E-class P450 group I signature 226 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS E-class P450 group I signature 365 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS E-class P450 group I signature 405 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS E-class P450 group I signature 134 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS E-class P450 group I signature 489 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS E-class P450 group I signature 345 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS E-class P450 group I signature 446 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 MobiDBLite consensus disorder prediction 1 25 - -
Bma06g00585 553 Coils Coil 287 307 - -
Bma06g00585 553 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 482 491 IPR017972 GO:0005506|GO:0016705
Bma06g00585 553 PRINTS P450 superfamily signature 480 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS P450 superfamily signature 489 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PRINTS P450 superfamily signature 356 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 PANTHER TRYPTAMINE 5-HYDROXYLASE 57 552 - -
Bma06g00585 553 Gene3D Cytochrome P450 77 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g00585 553 SUPERFAMILY Cytochrome P450 83 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00585 K24541 CYP71P1; tryptamine 5-hydroxylase [EC:1.14.-.-] - qsu:112034208 717.227
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00585 Bma-Chr6:31235023 Bma12g01061 Bma-Chr12:42800238 1.41E-134 dispersed
Bma06g00585 Bma-Chr6:31235023 Bma12g01058 Bma-Chr12:42675774 7.85E-122 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1126 . . Bda01g01726 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0717 . . . . . . . . . . . . Bma06g00585 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002472 0 1 0 1 0 4 0 3 2 3 3 4 0 3 2 0 4 4 0 3 5 3 2 2 1 3 1 2 1 1 58
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma06g00585 Bma_Chr06 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0