Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00624 ATGGAGGAAAGGGATATAATCGAAGAAAGAAGCAGCAGAGTGACAGGAAGCAGTGATGTTAGCGTCAACGAGTATAGGTGGGTCGACGGGAGCGAAGTGGACTCAGAGCCACTTCCACGGCGGCCGATGGAAGATAATGAAAGCGGGGAGATGCATGGAAGTGTGAGAAGGAGGCTGGTAAAGAAGCCTAAAAGATCTGATTCTTTTGATGTTGAAGCCATGGAAATAGCCGCCTCCCATGGCCACAGCTCCAAGAATCTTTCCACGTGGCAAACCCTTGCCTTAGCATTTCAAACACTCGGTGTGGTGTATGGCGATTTGGGGACCAGCCCGTTATATGTCTTTGCCGATGTTTTTAGCAAAGTGCGGATAGAGTCGGATGTCGATGTATTGGGGGCTTTATCGCTTGTAATGTACACAATTGCTCTTCTTCCTTTGGCAAAATATGTTTTCATAGTACTCATGGCCAATGATAATGGGGAAGGAGGAACATTTGCTTTGTATTCTCTCATTTGTAGGTATGCAAAAGTCAATATGCTGCCCAATCGTCAACCAGCCGATGAACACATCTCCAGTTACCGACTCAAATTGCCCACACCGGAGTTAGAACGGGCTTTATACATTAAAGAAAATTTAGAAAAGAGATCGTCTTTGAAAACGATTTTGCTGCTTCTGGTTCTCATGGGTACTTCCATGATTATAGGAGACGGTATCCTAACCCCTGCAATATCAGTGATGTCTGCAGTTAGCGGCCTGCAGGGAGAAATACCAGGACTCAACACAACTGCTGTCGTCGGCATCGCAATCGTGATTCTTCTGGGGCTGTTCAGTATACAGCAGTTTGGAACTGGTAAAGTAGGTTTTATGTTTGCTCCTGCAATTGCTCTGTGGTTCTTCTGTCTCGGATCGATTGGACTTTACAATCTCGTGAAGTACGATATCACTGTCCTGAGGGCGTTAAATCCGGCTTACATCTATTTGTTCTTCAAGAAGAATTCTAAAAATGCTTGGTCAGCTCTCGGTGGCTGTATATTGTGCGTAACAGGTGCCGAAGCCATGTTTGCCGATCTTGGCCATTTCTCCGTAAGCGCGATACAGATCGCCTTCACTTGCGTAGTCTTCCCCTGTCTTCTCTTGGCTTACATGGGTCAAGCTGCATATCTCATGAAATACCCGAATTCCGCATCGAGGATATTTTACGACTCCGTCCCAGACAGCCTTTTCTGGCCCGTCTTTGTGATAGCTACTCTGGCCGCCATGATTGCGAGCCAAGCGATGATTTCGGCTACGTTTTCTTGCGTCAAGCAATCAATGGCTCTCGGCTGCTTTCCGAGGCTGAAGATAATCCACACGTCAAGTAAGCGAATCGGTCAAATTTATATTCCGGTCGTGAATTGGTTTTTAATGTCCATGTGCATCGTCGTTGTGGCCATTTTTCAGAGTACTACCGATATCGCCAATGCCTATGGCATAGCTGAAGTGGGTGTGATGATAGTGACCACTGCCCTTGTCACCCTTGTGATGCTTCTGATATGGCAGACCAACCTGCTTATAGCTTTGTGGTTCCCCCTCCTGTTTGGGTCGGTCGAATTCGTCTATTTATGCGCGGTTTTATCAAAGGTCAAAGAGGGCGGTTGGCTGCCTTTGGCTTTTGCTTCGGTTTTCCTCTCTGTGATGTACACTTGGAACTACTGGGAGTGTGTTGAAGTACCAAAGCGAGGTTCAAGAGAAGATATCGATGGATTTGTTGTTCGAGCTCGGCTCCTCCCTCGGAACGGTCAGAGTGCCGGGAATCGGGCTGTTGTACAATGA 1812 47.08 MEERDIIEERSSRVTGSSDVSVNEYRWVDGSEVDSEPLPRRPMEDNESGEMHGSVRRRLVKKPKRSDSFDVEAMEIAASHGHSSKNLSTWQTLALAFQTLGVVYGDLGTSPLYVFADVFSKVRIESDVDVLGALSLVMYTIALLPLAKYVFIVLMANDNGEGGTFALYSLICRYAKVNMLPNRQPADEHISSYRLKLPTPELERALYIKENLEKRSSLKTILLLLVLMGTSMIIGDGILTPAISVMSAVSGLQGEIPGLNTTAVVGIAIVILLGLFSIQQFGTGKVGFMFAPAIALWFFCLGSIGLYNLVKYDITVLRALNPAYIYLFFKKNSKNAWSALGGCILCVTGAEAMFADLGHFSVSAIQIAFTCVVFPCLLLAYMGQAAYLMKYPNSASRIFYDSVPDSLFWPVFVIATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSSKRIGQIYIPVVNWFLMSMCIVVVAIFQSTTDIANAYGIAEVGVMIVTTALVTLVMLLIWQTNLLIALWFPLLFGSVEFVYLCAVLSKVKEGGWLPLAFASVFLSVMYTWNYWECVEVPKRGSREDIDGFVVRARLLPRNGQSAGNRAVVQ 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33376378 33379570 + Bma023569.1 Bma06g00624 84126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00624 603 PANTHER POTASSIUM TRANSPORTER 12-RELATED 18 565 - -
Bma06g00624 603 TIGRFAM kup: potassium uptake protein 95 566 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma06g00624 603 MobiDBLite consensus disorder prediction 26 63 - -
Bma06g00624 603 MobiDBLite consensus disorder prediction 29 56 - -
Bma06g00624 603 Pfam K+ potassium transporter 96 568 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma06g00624 603 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 18 565 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00624 Bma-Chr6:33376378 Bma13g00046 Bma-Chr13:543463 0 dispersed
Bma06g00624 Bma-Chr6:33376378 Bma06g00625 Bma-Chr6:33387765 8.05E-168 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00624 K03549 - tcc:18609410 904.434