Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00632 ATGTCCGTCTCGTGCTTGGATTGCTTATCGGACCTACTCTGCGATGAGGACTCGTTGGAAATATTGTCAGAACAGTCTCCTGGAAACTCGACGGAACTTGAATCTCCGCTTTACAACGAGGAGTCGATCGACGGATTCATTGAAAATGAGACCCAGCTCTTAGAAGAGGATTGTTTATCGGGCTTTCAATCACAGTGGCCTGAGGCTTCTTCAAGAGCAGAGTCTGTTGCATGGATTCTCAAGGTTCAAGATCATTATGGCCTTCAACCAGTGACAGCGTACCTCTCCGTCAACTACCTGGATCGGTTCCTATATTCTCGCCGCTTGCCGCAAACAAATGGCTGGCCGATGCAACTCCTCTCTGTTGCTTGTCTGTCACTGGCTGCTAAAATGGAGGAAACAGTGCTTCCTTCTTTGTTGGATCTGCAGGTTGAAGGAGCGAAATACATATTCGAACCTAAAACGATATTCAGGATGGAGCTCCTCGTGCTAAGGGTTTTAGAATGGCGATTACGATCCATAACGCCATTCAGCTTCATCAGTTTCTTCGCATGCAAGCTCGACCCGACGGCAACTTTTATGGGATTTCTGATTTCACGAGCTAAGGAAATTATCCTGTCTAATATTCGAGAAGCTAGCTTTCTCGTATTCCGGCCGTCGTGCATGGCTGTTGCGGCCTTACTGTGTGCAGCAAATGAAATTCCAAATTTGTCGCGTGAAAATCCCGAAGAAGCTGAGATGTGGTGCAAAGGCCTCAGCAAAGAAAAAATCATAGGCTGCTACCGGTTAATGCAAGAATCTCTCCTCCACAACCGCCGGAGATCGACGCCACCGAAGATAATACCACAGCTCCGGCTGACAACTATTCCAACTAGTTTCGGGTCCGATGATTCTTCATCATCATCATCATCATCATCATCAGTCTTTTCGTCGCCACATAAAAGGAGAAAACTAGCGAACTGCTGA 966 47.0 MSVSCLDCLSDLLCDEDSLEILSEQSPGNSTELESPLYNEESIDGFIENETQLLEEDCLSGFQSQWPEASSRAESVAWILKVQDHYGLQPVTAYLSVNYLDRFLYSRRLPQTNGWPMQLLSVACLSLAAKMEETVLPSLLDLQVEGAKYIFEPKTIFRMELLVLRVLEWRLRSITPFSFISFFACKLDPTATFMGFLISRAKEIILSNIREASFLVFRPSCMAVAALLCAANEIPNLSRENPEEAEMWCKGLSKEKIIGCYRLMQESLLHNRRRSTPPKIIPQLRLTTIPTSFGSDDSSSSSSSSSSVFSSPHKRRKLANC 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33527117 33531242 - Bma023578.1 Bma06g00632 84134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00632 321 MobiDBLite consensus disorder prediction 293 321 - -
Bma06g00632 321 SMART cyclin_7 77 165 IPR013763 -
Bma06g00632 321 SUPERFAMILY Cyclin-like 155 276 IPR036915 -
Bma06g00632 321 Gene3D - 55 172 - -
Bma06g00632 321 MobiDBLite consensus disorder prediction 293 313 - -
Bma06g00632 321 CDD CYCLIN 71 164 IPR013763 -
Bma06g00632 321 Pfam Cyclin, N-terminal domain 45 171 IPR006671 -
Bma06g00632 321 PANTHER CYCLINS 3 305 IPR039361 -
Bma06g00632 321 SMART Cyclin_C_2 174 307 IPR004367 -
Bma06g00632 321 ProSitePatterns Cyclins signature. 72 103 IPR006671 -
Bma06g00632 321 SUPERFAMILY Cyclin-like 38 171 IPR036915 -
Bma06g00632 321 Gene3D - 52 255 - -
Bma06g00632 321 Pfam Cyclin, C-terminal domain 174 275 IPR004367 -
Bma06g00632 321 PANTHER CYCLIN-D1-1 3 305 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00632 Bma15g00199 CCT
Bma01g00063 Bma06g00632 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02590 Bma-Chr1:83529174 Bma06g00632 Bma-Chr6:33527117 8.52E-55 dispersed
Bma06g00632 Bma-Chr6:33527117 Bma14g01747 Bma-Chr14:37599007 4.99E-126 dispersed
Bma12g00136 Bma-Chr12:1979877 Bma06g00632 Bma-Chr6:33527117 4.29E-19 dispersed
Bma01g01857 Bma-Chr1:68124248 Bma06g00632 Bma-Chr6:33527117 2.09E-25 transposed
Bma01g00063 Bma-Chr1:642030 Bma06g00632 Bma-Chr6:33527117 1.06E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00632 K18810 - fve:101292695 381.333