Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00653 ATGGCTTTGGTTCAGGTACAAGAGACGCCTAGATGGAAGAAGCTCTTGAGTTACGTTGGTCCTGGCGTTCTTGTCTCTGTTGCTTATCTCGATCCTGGAAACTTGGAGACTGATTTACAGGCAGGAGCAGATCACAAATATGAGCTGCTGTGGATCGTACTTCTGGGGCTTATCTTCGCTCTCATAATCCAATCTCGTTCAGTAAATCTAGGCGTTGCTACAGGGAAGCATCTGGCTGAGCACTGCAAACTCGAATATCCAGCACCAGTGAAATACTGTTTGTGGGTTCTCGCAGAAGTTGCTGTCATAGCAGCTGACATTCCAGAAGTAATCGGAACAGCTTTTGCTCTGAACATTCTCCTCCATATACCTATATGGGTTGGGGTTCTACTGGCTGGATTAAACACCCTCCTGCTGCTTGGTCTTCAACGATATGGAATTAGGAAGTTGGAGGTTGTAATTGGGAGCCTAATAGTTGTAGTGGGAAGCTGCTTCTTTAGCGTGGTGGTAAGTGCTAGACCAAGGCTGGAGGAGATGATGAGCGGTATGTTCATCCCGAAGTTGAACGGCAACAACGCCACCAGAGATGCAGTCGCTCTTCTAGGCGCTCTCATCATGCCTCACAATCTTTTCCTTCACTCAGCGTTGGTCATCTCGAGGAAATTCCCCCATTCTTCTCAAGCCATCAGGAGTGCGAGCAAATACTTCTTGATCGAAAGTGGGGTCTCCTTGCTTCTCGCATTTGCTATCAACGTGGCCGTGATTGCAGTAACTGGCAGCATATGCTCCGACCCAACGATCTCCTCGGAGACCAACAATCATTGCAAAGATGTTACTCTTGAATCTGCATCCTACCTGCTTAAGAACGCACTCGGAAACTGGAGTTCAAAATTATACGCCATATCGTTGCTCGCATCTGGCCAGAGTTCGGTGGTAACCGGAACATATGCCGGCCAATTCATAATGCAGGGTTTTCTAGATTTGAAGATGGAACTCTGGTTGAGAAACTTGATTACCAGAGTAGCTGCAGTGGCTCCAAGCCTGATCCTAAGCATCATCGCCGGACCGTCAGGAGCTGCACGGCTAATTATTATCGCTTCTATGGTTCTATCATTTGTTCTGCCATTTGCTCTGGTTCCTCTCCTCAAGTTCACAAACAGTGAAGCAAAGATGGGTCAACACAAGAACTCTCTAACGGTGACAATTATCTCGTGGCTCTTGGGATTTTCGACAATAGCAATCAACCTGTACTTCTTAAGCACCACTGTGATTGGTCTGATGACAAGGAATCGGCTACCGAAAGCTCTGCTGATTCTCATAGAAGTGGTGGTTTTTCCTGTAATGATGCTTTATATTGCCTTGCTCCTATACTTGATTACCAAGAAAGTATCACCAGAAGTTGAATCCACAGAATTGGAAATTTATGCGAGCAGTTCGGACCAAACAATGCCCCCGGCCGAGACAGTCGCAGCCTTGTCTAACACCCGGCAACCCAATGAAATTGAGATGAGTGAAGGCGACATTGTCCTGGCCTAA 1536 46.94 MALVQVQETPRWKKLLSYVGPGVLVSVAYLDPGNLETDLQAGADHKYELLWIVLLGLIFALIIQSRSVNLGVATGKHLAEHCKLEYPAPVKYCLWVLAEVAVIAADIPEVIGTAFALNILLHIPIWVGVLLAGLNTLLLLGLQRYGIRKLEVVIGSLIVVVGSCFFSVVVSARPRLEEMMSGMFIPKLNGNNATRDAVALLGALIMPHNLFLHSALVISRKFPHSSQAIRSASKYFLIESGVSLLLAFAINVAVIAVTGSICSDPTISSETNNHCKDVTLESASYLLKNALGNWSSKLYAISLLASGQSSVVTGTYAGQFIMQGFLDLKMELWLRNLITRVAAVAPSLILSIIAGPSGAARLIIIASMVLSFVLPFALVPLLKFTNSEAKMGQHKNSLTVTIISWLLGFSTIAINLYFLSTTVIGLMTRNRLPKALLILIEVVVFPVMMLYIALLLYLITKKVSPEVESTELEIYASSSDQTMPPAETVAALSNTRQPNEIEMSEGDIVLA 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35092702 35095767 + Bma023617.1 Bma06g00653 84155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00653 511 PANTHER METAL TRANSPORTER NRAMP5-LIKE 4 509 - -
Bma06g00653 511 Hamap Divalent metal cation transporter MntH [mntH]. 1 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 4 509 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 13 389 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 Pfam Natural resistance-associated macrophage protein 36 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 PRINTS Natural resistance-associated macrophage protein signature 335 352 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 PRINTS Natural resistance-associated macrophage protein signature 197 220 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 PRINTS Natural resistance-associated macrophage protein signature 307 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 PRINTS Natural resistance-associated macrophage protein signature 122 141 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 PRINTS Natural resistance-associated macrophage protein signature 147 168 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 PRINTS Natural resistance-associated macrophage protein signature 94 120 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma06g00653 511 PRINTS Natural resistance-associated macrophage protein signature 367 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00313 Bma-Chr6:5123020 Bma06g00653 Bma-Chr6:35092702 0 dispersed
Bma06g00653 Bma-Chr6:35092702 Bma15g00424 Bma-Chr15:4599585 3.06E-180 dispersed
Bma06g00653 Bma-Chr6:35092702 Bma03g01128 Bma-Chr3:14874165 5.94E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00653 K21398 - vvi:100262929 696.427