Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00655 ATGGCGGAATCTGTAGAAATGAATCTTCCCAGCAAGGCATTTGGCTGGGCTGCGAGAGATACTTCTGGTGTTCTCTCTCCTTTCCATTTCTCGAGAAGAGCAACAGGAGAGAAGGATGTCAAATTTAAGGTGCTTTACTGTGGGGTGTGTCATTCCGACTTTCACATGGCCAAGAACGATTGGGGAATATCCACATATCCTGTCGTACCAGGACATGAGGTCGTAGGTATAGTGACGGAGGTTGGCAACAAAGTGGAGAAGTTTAAGGTCGGAGACAGGGTGGGGGTGGGATGCTATGTCGGATCGTGCCGCTCGTGCGACGATTGTTCGAACAACCTCGAAAATTACTGCCAAAAAGCGATATTCACCTACGCATCCAAATACTTCGACGGCACCACCACATACGGAGGTTACTCCGACCACATGGTGACCGATGAACAGTTTGTCGTTCGCATTCCGGACAGCCTCCCACTGGATGCTTCTGCACCGTTGTTATGTGCTGGCATCACTGTTTACAGCCCGTTGAGGTATTACGGGCTCGATAAGCCTGGATTGCGGGTTGGTGTTGTAGGCCTCGGCGGCGTCGGCCATGTTGCCGTAAAATTTGCCAAGGCGTTCGGCGCTAAGGTCACAGTGATTAGCACATCAGCTAATAAAAAGGAGGAGGCTCTTCAACATCTTGGTGCTGACTCCTTTTTGATTAGCCATAATCAAGAAGAATTACAGGCCGCCATGGGCACGTTTGATGGTATCCTCGACACTGTCTCTGCAGTTCATTCTCTTCTTCCTCTACTCGGACTTTTGAAATCACATGGAAAACTTATTTTGCTGGGAATACCAGATAAGCCTTTTGAACTTCCGTCGTTTCCCCTCGCTATCGGCAGGAAAATGGTGGCCGGAAGTGCCGCCGGGGGTCTGAAGGAGACCCAAGAAATGATAGATTTTGCGGCCAAACACAACATAACGGCGGACATCGAGGTTATTCCGATTGACTACGTGAATACAGCCGTGGAGAGGCTTCTGAAAGCAGATGTCAAATATCGATTCGTTATCGATGTTGGCAACACCTTGGGTTGA 1077 49.3 MAESVEMNLPSKAFGWAARDTSGVLSPFHFSRRATGEKDVKFKVLYCGVCHSDFHMAKNDWGISTYPVVPGHEVVGIVTEVGNKVEKFKVGDRVGVGCYVGSCRSCDDCSNNLENYCQKAIFTYASKYFDGTTTYGGYSDHMVTDEQFVVRIPDSLPLDASAPLLCAGITVYSPLRYYGLDKPGLRVGVVGLGGVGHVAVKFAKAFGAKVTVISTSANKKEEALQHLGADSFLISHNQEELQAAMGTFDGILDTVSAVHSLLPLLGLLKSHGKLILLGIPDKPFELPSFPLAIGRKMVAGSAAGGLKETQEMIDFAAKHNITADIEVIPIDYVNTAVERLLKADVKYRFVIDVGNTLG 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35204886 35206423 - Bma023618.1 Bma06g00655 84157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00655 358 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 6 357 - -
Bma06g00655 358 PANTHER ALDEHYDE REDUCTASE 6 357 - -
Bma06g00655 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Bma06g00655 358 CDD CAD1 14 352 - -
Bma06g00655 358 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Bma06g00655 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Bma06g00655 358 SUPERFAMILY GroES-like 20 184 IPR011032 -
Bma06g00655 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Bma06g00655 358 Gene3D - 16 353 - -
Bma06g00655 358 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Bma06g00655 358 Gene3D - 167 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01194 Bma-Chr3:17950504 Bma06g00655 Bma-Chr6:35204886 0 dispersed
Bma03g01363 Bma-Chr3:30918434 Bma06g00655 Bma-Chr6:35204886 1.32E-112 dispersed
Bma06g00531 Bma-Chr6:27263080 Bma06g00655 Bma-Chr6:35204886 8.62E-153 dispersed
Bma06g00655 Bma-Chr6:35204886 Bma14g00086 Bma-Chr14:1203837 1.98E-116 dispersed
Bma06g00655 Bma-Chr6:35204886 Bma06g00315 Bma-Chr6:5280906 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00655 - - qsu:112006220 567.0