Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00669 ATGGAGAAAGAAGCTGGGAATGGTAGAGTTGAGGGTTGGGAGATGAAAGGTTCAAATGGAAAGAAGAATAAGGGAAACGTTGAGGAAGAGGAAGAAGAAGTGGTTGGGTGTTGGATTGCGCTGAAAATTTTTGGAAGTTGCATTTCTTCTAGATCCAAAGTTGACAGCTCAGTGTCTGGAACGGGAACCAGTACTGTTTATGCTGAAAATAAATCAGCAACTGACACAAGCAGAGATCAACCGGCAATTACTGGAGTATCTTCAACGACGACTAGCAATAGCAATGGAGAGAGTAATTCGTCCAATTCCAAGCTTGAAGAGGAACTTAAAATTTCTCCATGTCTTCGAAAATTTGCATTTAATGATCTTAAGTTAGCAACAAGAAATTTTAGACCTGAGAGCCTTCTTGGAGAAGGTGGTTTTGGCTGTGTCTTCAAGGGCTGGATTGAAGAAAATGGAACTGCTCCTGTAAAGCCCGGTACAGGACTTACTGTTGCCGTCAAGACCCTTAACCTCGATGGCCTTCAGGGTCACAAAGAATGGATGGCTGAAGTAAATTTTCTTAGTGACCTTGTACATCCGAACTTGGTAAAACTTATCGGTTACTGCTGTGATGATGATCAGAGGTTGCTAGTATATGAATTTATGCCACGAGGAAGCTTGGAAAATCACCTTTTCCGAAGGTCCCTGCCTCTTCCTTGGTCTATGAGGATCAAAATTGCATTAGGTGCTGCAAAGGGTCTCGCTTTTCTTCACGAGGAAGCAAAAAGGCCTGTCATATACCGTGATTTTAAGACATCAAACATCCTATTAGATGCAGACTACAATGCCAAGCTCTCTGATTTTGGACTCGCCAAAGATGGTCCTGAGGGAGACAAAACCCATGTCTCTACCCGTGTCATGGGAACATATGGTTATGCAGCCCCTGAATATGTAATGACTGGACATCTCACGTCTAAGAGCGATGTGTACAGTTTTGGTGTAGTTCTTCTCGAAATGTTAAGCGGGAGAAGATCTATGGACAAAAACAGACCCAATGGAGAGCATAATCTGGTCGAATGGGCTCGGCCATATCTCGGAGAGAGAAAACGGTTTTACCGATTGATTGATCCGAGGCTCGAAGGTCACTTTTCGATAAAGGGTGCTCAGAGAGCGACTCAGTTGGCTGCACACTGCCTGACCCGAGACCCGAAAAGCCGGCCATTAATGAGCGAAGTTGTGGAAGCATTAAAGCCGCTGCCAAACCTCAAGGACATGGCCAGCTCTTCATACCATTTTCAGAATGTGGGAATGAGCTCAAATGTTAAAAATGGTGGGATTATTCAAGGAGGATCATATTCAAGGAATGGACAGCTGCTTAGAAGCCCTTCTGTTCTGAATGGTTCTCATGTTTCTCCTTACCACCATAATCATCATCATCCTCATCATTCTCCTAAGCCTGTTGTTAAATCATAG 1455 43.85 MEKEAGNGRVEGWEMKGSNGKKNKGNVEEEEEEVVGCWIALKIFGSCISSRSKVDSSVSGTGTSTVYAENKSATDTSRDQPAITGVSSTTTSNSNGESNSSNSKLEEELKISPCLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNLDGLQGHKEWMAEVNFLSDLVHPNLVKLIGYCCDDDQRLLVYEFMPRGSLENHLFRRSLPLPWSMRIKIALGAAKGLAFLHEEAKRPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLSGRRSMDKNRPNGEHNLVEWARPYLGERKRFYRLIDPRLEGHFSIKGAQRATQLAAHCLTRDPKSRPLMSEVVEALKPLPNLKDMASSSYHFQNVGMSSNVKNGGIIQGGSYSRNGQLLRSPSVLNGSHVSPYHHNHHHPHHSPKPVVKS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35919201 35922956 + Bma023637.1 Bma06g00669 84171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00669 484 CDD STKc_IRAK 136 413 - -
Bma06g00669 484 Gene3D Transferase(Phosphotransferase) domain 1 216 433 - -
Bma06g00669 484 ProSiteProfiles Protein kinase domain profile. 130 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00669 484 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 61 472 - -
Bma06g00669 484 MobiDBLite consensus disorder prediction 69 105 - -
Bma06g00669 484 ProSitePatterns Protein kinases ATP-binding region signature. 136 168 IPR017441 GO:0005524
Bma06g00669 484 PANTHER OS01G0588500 PROTEIN-RELATED 61 472 - -
Bma06g00669 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Bma06g00669 484 Pfam Protein tyrosine and serine/threonine kinase 134 410 IPR001245 GO:0004672|GO:0006468
Bma06g00669 484 MobiDBLite consensus disorder prediction 466 484 - -
Bma06g00669 484 Gene3D Phosphorylase Kinase; domain 1 88 215 - -
Bma06g00669 484 MobiDBLite consensus disorder prediction 451 484 - -
Bma06g00669 484 SUPERFAMILY Protein kinase-like (PK-like) 106 410 IPR011009 -
Bma06g00669 484 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00315 Bma-Chr1:2583860 Bma06g00669 Bma-Chr6:35919201 1.39E-174 dispersed
Bma06g00669 Bma-Chr6:35919201 Bma14g01544 Bma-Chr14:31239035 0 dispersed
Bma10g00033 Bma-Chr10:390713 Bma06g00669 Bma-Chr6:35919201 4.59E-116 dispersed
Bma11g00759 Bma-Chr11:20158084 Bma06g00669 Bma-Chr6:35919201 1.52E-132 dispersed
Bma15g00679 Bma-Chr15:11162224 Bma06g00669 Bma-Chr6:35919201 3.08E-117 dispersed
Bma06g00669 Bma-Chr6:35919201 Bma03g00130 Bma-Chr3:1002493 9.70E-156 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66544 PF07714 PK_Tyr_Ser-Thr 2.10E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00669 - - qsu:112039412 698.738