Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00686 ATGCGAAGATCGATTCTACGTATACAGGGGGACTGTAAACCTGAAAGCAACAGTAACATTATGGATCCGATCAAGCTTCATATACGATCTAGCTCCCGTTCCAATCTGTTTACACGAAATTCCGCAAAGCATGCAACCAAATCCAAGTTGTTGATTTCTGCAACGTGTGCGCTGGTCTTGGCTTTGTTATTTTGCTATTTATTTTTGTCTGCTAAAAATGTTTGGAGCTCCGAGAAGAGAAGGTACGGAATTGTTATCGATGGAGGTAGTACGGGCACTCGAATCCATGTATTTGCATACAAAGTGGAAGGAAATAATGCGGTATTTGATTTCGGGAAGGAGGGGTTAGCATCAATGAGGCTGACGCCTGGACTGTCGGCATATGCGGACGATCCAGATGAGGCGGGGAATTCAATTGGGGAGCTTTTGCAGTTTGCCAGGGAACGGATTCCAAAGAACCAATGGGGAAGTACTGAAATACAGTTAATGGCGACTGCAGGATTGAGGATACTTGAATCGGGTGTGCAGGAACAGATATTGCAGTCGTGTCGTCAGGTCCTTCGATCATCAGGGTTTAAGTTTCAGGATGATTGGGCTAAGGTTATCTCTGGCTCCGATGAAGGAATTTTCGCTTGGGTTGTTGCAAACTATGCCCTTGGCACCCTCGGAGGTGATCCTCAAGAGACTACTGGGATTATTGAACTCGGCGGGGCTTCAGCACAGGTAACATTTGTTTCAAGTGACCCAGTACCTCCCGAGTTCTCTCATACAATTAAATTCCGCAATGTAACTTATAATCTATATAGCCACAGCTTTCTTCATTTTGGCCAGAACGCGGCACATGACTCGTTAAGAGAAGCTCTACTTTCAAGAGATTTTAACTTAGGCAAATCTCTTCGAGAGGGGATGCTTATAGATCCATGTGCTCCCAAAGGGTACTCGCAGAGCATCCAGTCGTGGACTATGTCTCCTGATTCTTTGATTAGAGGAAGAGAATACTTAACCACCGTTCATTCCAGAGGAAATTTCTCAGAGTGCCGATCTGCTGCATTAGAGATGTTGCAGAAAGGAAAAGGCAGATCTTTTACATTACATTGCAACATCGGATCGACTTTCATACCCAAGCTCAGGGGAAAGTTTTTGGCCACAGAAAATTTCTTCTATACATCAAAGTTCTTTCATTTGGACTCGAGGGCGTTTCTTTCTGATCTCATGACGGCTGGAGAACAATTCTGTGGGGAAGACTGGTCACAATTGAAAAAAAGGTATAAAACGCTTAGTGAAGAAGATTTGCTTCGATATTGCTTCTCATCGGCTTACATTGTGGCCCTACTTCACGACGGGCTTGGAATTGCTTTAGACGACCAAAGTCTTGTGGTGGCAAATAACGTGGAAAAAATATCACTTGATTGGGCGTTGGGAGCCTTTATCTTACGAAGCACAAACGCCATAACCGGCGAGAATTCCGGCTGGATTGCCAACATCATCAGCTATGAATCACCCACTTTGCTATCACTCATTGCCATCTCTATGCTCCTGTTGTTTATAGCATGGTCTATATCAAAATTGAGGAAACCTGAGTTAAAGACGATTTACGATCTAGAGAAAGGACGATACATTGTCACCCGAGTCAATAGATTCTGA 1644 44.04 MRRSILRIQGDCKPESNSNIMDPIKLHIRSSSRSNLFTRNSAKHATKSKLLISATCALVLALLFCYLFLSAKNVWSSEKRRYGIVIDGGSTGTRIHVFAYKVEGNNAVFDFGKEGLASMRLTPGLSAYADDPDEAGNSIGELLQFARERIPKNQWGSTEIQLMATAGLRILESGVQEQILQSCRQVLRSSGFKFQDDWAKVISGSDEGIFAWVVANYALGTLGGDPQETTGIIELGGASAQVTFVSSDPVPPEFSHTIKFRNVTYNLYSHSFLHFGQNAAHDSLREALLSRDFNLGKSLREGMLIDPCAPKGYSQSIQSWTMSPDSLIRGREYLTTVHSRGNFSECRSAALEMLQKGKGRSFTLHCNIGSTFIPKLRGKFLATENFFYTSKFFHLDSRAFLSDLMTAGEQFCGEDWSQLKKRYKTLSEEDLLRYCFSSAYIVALLHDGLGIALDDQSLVVANNVEKISLDWALGAFILRSTNAITGENSGWIANIISYESPTLLSLIAISMLLLFIAWSISKLRKPELKTIYDLEKGRYIVTRVNRF 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 36760524 36763853 - Bma023663.1 Bma06g00686 84188

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00686 547 PANTHER APYRASE 6-RELATED 32 542 - -
Bma06g00686 547 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 32 542 IPR000407 GO:0016787
Bma06g00686 547 Pfam GDA1/CD39 (nucleoside phosphatase) family 76 480 IPR000407 GO:0016787
Bma06g00686 547 Gene3D - 81 477 - -
Bma06g00686 547 Gene3D Exopolyphosphatase. Domain 2 203 465 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00686 K01510 ENTPD1_3_8, CD39; apyrase [EC:3.6.1.5] - jre:108988782 723.776
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00686 Bma-Chr6:36760524 Bma06g00710 Bma-Chr6:37524215 0 dispersed
Bma06g00686 Bma-Chr6:36760524 Bma05g01350 Bma-Chr5:53045068 6.11E-42 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g917 . Blo16g01115 . Bda11g01215 Bpe13g01410 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0583 Cone9ag0586 . . . . . . . Bda11g01215 . . . Bma06g00686 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006326 1 1 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 2 1 2 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma06g00686 Bma_Chr06 FPKM 31.883492 34.534218 17.02936 18.335068 20.731577 20.550022 21.804831 18.364349 18.074963 18.974249