Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00699 ATGGCAGTGTCTGGTTTTCTCGTAGTGTGCTTTCTCTTGTCACTTTCCTCGGCCAATGGCTATGGCGGAGAAGGCTGGATTGACGCCCACGCCACCTTCTACGGCGGAAGCGATGCCTCAGGAACAATGGGCGGGGCTTGTGGGTACGGAAACCTCTACAGCCAAGGCTATGGCACAAACACAGCAGCTCTAAGCACCGCTCTGTTCAACAGCGGACTGAGCTGCGGCTCTTGCTACGAGATCAGATGCACCGGCGACCGGAAATGGTGCCTTTCTGGCTCGATTGTGGTGACGGCGACCAACTTTTGCCCGCCCAATAATGCACTTCCTAACGACGCCGGCGGCTGGTGCAACCCGCCCAGGCACCATTTTGACCTTTCTCAGCCTGTTTATCAACGCATTGCGCAGTACAGAGCTGGAATAGTCCCTGTTTCGTACAGAAGGGTACCCTGCAGAAGAAGGGGAGGGATCAGATTCACCATTAACGGCCACTCCTACTTCAACCTGGTTCTGATAACAAACGTGGGAGGCGCCGGCGACGTCCATGCAGTTTCCGTCAAAGGTTCCAGAACCGGTTGGCAGCCAATGTCAAGAAACTGGGGCCAAAACTGGCAGAGCAACTCCTACCTTACCGGACAGACCCTTTCGTTCAAAGTCACCACCAGCGACGGCCGGAGCGTAATGTCCTACAACGTTGCCCCGGCCGGCTGGTCCTTCGGGCAGACCTACAGTGGGGCTCAATTTATC 747 56.09 MAVSGFLVVCFLLSLSSANGYGGEGWIDAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYEIRCTGDRKWCLSGSIVVTATNFCPPNNALPNDAGGWCNPPRHHFDLSQPVYQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSVKGSRTGWQPMSRNWGQNWQSNSYLTGQTLSFKVTTSDGRSVMSYNVAPAGWSFGQTYSGAQFI 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 37211612 37212743 - Bma031292 Bma06g00699 84201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00699 249 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bma06g00699 249 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
Bma06g00699 249 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Bma06g00699 249 PRINTS Expansin/Lol pI family signature 139 155 IPR007118 GO:0005576
Bma06g00699 249 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Bma06g00699 249 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Bma06g00699 249 SUPERFAMILY PHL pollen allergen 153 244 IPR036749 -
Bma06g00699 249 SMART dpbb_1 61 146 IPR007112 -
Bma06g00699 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 166 245 IPR007117 -
Bma06g00699 249 PANTHER EXPANSIN 6 248 - -
Bma06g00699 249 PRINTS Expansin signature 202 223 IPR002963 GO:0009664
Bma06g00699 249 PRINTS Expansin signature 155 167 IPR002963 GO:0009664
Bma06g00699 249 PRINTS Expansin signature 114 131 IPR002963 GO:0009664
Bma06g00699 249 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Bma06g00699 249 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Bma06g00699 249 PRINTS Expansin signature 131 144 IPR002963 GO:0009664
Bma06g00699 249 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Bma06g00699 249 PRINTS Expansin signature 167 188 IPR002963 GO:0009664
Bma06g00699 249 PRINTS Expansin signature 231 247 IPR002963 GO:0009664
Bma06g00699 249 SUPERFAMILY Barwin-like endoglucanases 9 174 IPR036908 -
Bma06g00699 249 Gene3D - 14 152 IPR036908 -
Bma06g00699 249 Gene3D - 156 249 IPR036749 -
Bma06g00699 249 PANTHER EXPANSIN-A15 6 248 IPR002963 GO:0009664
Bma06g00699 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 156 IPR007112 -
Bma06g00699 249 Pfam Lytic transglycolase 61 146 IPR009009 -
Bma06g00699 249 Pfam Expansin C-terminal domain 157 234 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00699 Bma14g01653 CCT
Bma06g00699 Bma15g00149 CCT
Bma06g00699 Bma14g01653 ECH
Bma06g00699 Bma15g00149 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00699 Bma-Chr6:37211612 Bma15g00149 Bma-Chr15:1543263 7.28E-154 dispersed
Bma08g01113 Bma-Chr8:50094989 Bma06g00699 Bma-Chr6:37211612 1.15E-126 dispersed
Bma11g00114 Bma-Chr11:1110498 Bma06g00699 Bma-Chr6:37211612 2.30E-126 dispersed
Bma06g00694 Bma-Chr6:36989179 Bma06g00699 Bma-Chr6:37211612 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00699 - - pop:7481578 459.144