Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00700 ATGTATTCGTCCAGAGGAAGTGGTGCGTATGGTCAGCAGTCATATAGTGGGCAGTCCGTATATGGCCAAAATATGGGAGGCGTCTATTCTGGAAGTTCTGTTGGGGGACATGATAATGGCTCACATCACTCACTATCTTCTCGCCATGCATCAATGTTGGGGACTTCTCAGGAAGCAGATGCTTCTGCATACAGGGGACATTCTTCAACGACTACAAATTATGGTGGACAATATAGTTCTTTGTATAGTTCTGCTTCATTGGGTGGTACCACACAGGTACCCCCAATGAGTGTCAAAGGTTCTGGGTCATCAGTTTTGGAAGGTCGTGGCGCCTATGCCTCTGCTATTCCTAATTCACCCAAGTTTTCTTCCAGTGAATATGTCTCCTCATCAAACCATGGTTATGGTCAAAAAACTGATCCTTTTTTTTCAGAGAAGGTTCCTGAATATCCCACGCTTGAGAGACGTCAATATAGTGAGCGACAGAGTACTTATATCCCGAGGGACATGCAGAATGAACAAACAGGAAGATACTTGGATTCTGCTAGTTTCGGTCATCAGCGTCACTCAGACATGTATGATCGCATTGATCCAGTCCCCCTACTTCGACAAGAACAGTTGCTCAAAGTTCAATCGCTGCAGTCTTCCACCCATGATGGGAATGCAAGACAAAATGATTATCTTGCAGCAAGAACCACTGTTAGTCGTCATTCTGCTCAAGAAGTCGTACCATATGGAGGAAGAGTAGATGCTGACCCTCGCAGTATATCAGCCCTTAATACTTCATATAGCGGTCAACGTACTCCATCAATATTAGGAGTTGCTCCAAGGAGAGATGTGGATGAACTTCTCTACTCCCAAAGTTCATCAAACCCAGGTTATGGAGTGAGCTTACCTCCTGGTAGAGACTACGCCTCTGGAAAAGGTCTACACGGCACATCTCTAGAGTCAGATTACTCTGGTGGAATTTTATCACGTGGTGGTCATTCAAGGATTGATGACCGCAAGGACGAAAAAGCTGGTTATCTTCGGGAATTTGAGCTTCGAGAGGAGGAGCGACGTAGGGAGCGTATACGTGTCAGAGAGAAAGAAAGAGATCGGGAGAAGGAACGCGAGCGTGAATCAGAAAGAGAAAGAGAAAGAGAAAGAGAACGGGAACGCGAACGCGAACGCGAACGAGAAAGAGATCGAGATCGAGATCGAGAACGGGACAAGGAAAGGGAACGTGAACGAGAACGATTGTTGGTGCGACAAAAGTTAAGAGAACGTGAAAACAAACGAGGAATTGAGATCAGGCGAGAACGAACTCCACCAAGGGCATCTAGGGATCGTCGTGGTTCATCCTTGACGAAGGAGGGAAAACTCTTGCGACGAGATTCTCCATATCATGAAGCTTTGCATAGGCGTCATTCACCTATTAAAGAGAAAAGGAGAGAATATGTCTGCAAGGTATATTCATATAATTTTGTTGACGTGGAGAGGGATTATTTATCAATAGATAAGCATTATCCCCGACTCTTTATACCCCCTGAATTTTCAAAAGTCGTTATGAATTGGCCTAAGGAGGAACTGAAACTGTCTATTCATACACCTGTCAGTTTTGAGCATGATTTCATCGATGAAGGGAGTGGAGATGCGTCTAAAGAGCCACGATTTGATGTTTCGGCTGTAGATTCTGCAAAGTCTGAACATGTAAATGTAGTGTGGAATGCAAAGATTGTTTTAATGAGCGGCCTGAGCAGAAATGCTTTGGAGGATTTGTCTTCTGAAAGAAGTCAAGAAGATCGAATACCACATATTTGCAATATCCTTAGATTTGCAGTTCTTAAAAAGGACCATGCTATAATGGCGATTGGTGGCCCTTGGAAATCTGATGATGGAAATGCTCCTTCAATTGATGGTTCCTCTTTGTTTCAAACAGCTCTTAGATATGCAAAGGATGTTGCACAAGTTGATTTGCAGAATTGCCTCCATTGGAATCGTTTTCTTGAGATTCACTATGATAGACTCGGCAAGGATGGGCTATTTAGCCATAAAGAGATTACTGTACTTTTCGTCCCGGATTTGTCTGACTGTGTCCCTTCATTGGAAATGTGGCGTGAACAATGGCTTGCTCATAAGAAGGCAATTGCTGATAGAGAGCGGCAACTTTCGAAAGAGGTTTATAAGAAAATACAAGAAAAAATGGAAAAGAACCAAGAGTCTCTGTCTTCCAAGCCAGATGGTGTCGAAGATAAGGAGAAAAACAGTAAGGATGTTAATAAGAATTCAACTGAGAAAAATGATGATGGAAGTGACAAAAATCTTGATAAGAAAGTCATGGGCGAAAAATGTGTAGAGGAAGAGGATATCGAGAAGAAAAAGGAGGAAGTGGCTGTTGGCAACGTGAAGAAAGGAAAAAAGAAAGTTATAAAGAAGGTGATCAAACAGAAGGTTAAAATTGGTGATGCTGCGATAAACAAAAACGACGAGCAGGGTGGAAAGGAGAATACAGAAAAGAACTTGGGGTCAGATATTGCTGTTACAGCTACACAGGATGAATCTTTGGCTGATCCTACAAAGGTTAAAACTTTTGTCAGAAAAAAAATTGTTAAAAAAGTTCCTGTGGAAAAGACTACTGACGGTGAAAACAAAGGGAGTCAATTGGGATCAAAGGATGAAAATAAGGACAGCTCAGAAGATAAAAAGGATGATCCAAATAGTGTGGTTGCTGTGAAAGATAATGCAGTAAAAACTACTGTAAAGAAAAAAGTAATTAAGAGAGTTCCTAAAAGAAAAGTATCTGAAGTGAAATCAAATATTGGGGGAGTCGACGATAATGTTGATGGTAACAAGGATGAGACTGATGTTGCAAAAGATATGGCAGAAAATAAAATGGATCTCCCCATGGGTGAAGAAAGCCTGGATGCCAAGAAAACAGAGAAGAAATTGGCTCCAGAAACCAAGTCAAAGGGTGACAAGGATGAAAAGGGAGATGAAAATAAAGTTAGCTCTGTGCCAAAATCGGCTAATGAGGTTGACCGGCAGAAAAAGGCTCAGAATGGAGGAAATAATGGCGACGCAGAGCAATCAAAGGATGGAGAAAAACCAAAAGATGGCAAAGATGAGATAGGCAAAGATGGAAAGAATGAGTCTAGAGGCAGCAAGGAAGTAAAGGAAAAGAAGTCTGTAGATCCTCCTCGGCACCCAGGATTTGTTTTACGGACGAAAGGAAGCAAGGATTCTAAACTACGATCTACATCACTTTCCCTGGATTCTCTTTTGGAATACACTGATAAGGACACTGACGAATCAACATTTGAGCTTTCACTATTTGCCGAATCACTGTATGAAATGTTTCAGTATCAGATGGGTTGTCGTATTTTTACTTTCCTTCAGAGACTACGACTTAAATTTGTAATGAAAAGAAACGAACGCAAGAGGCAGCGGTTAGAAATGGACCAAGAGAATGACAAAAAATCATCACCAAAGCGTCAAAAAATTGACGAGTCTCCTGCCGAGAAACAGTCTACTACATCTACTGTCGAGGGTTCATCTCAACCAGATAATGAAAAAACTGAAGTGAAACAGAGTAGTCCAACTGATCATGTGGATGAAACAATGAGGGAAAATGAAATTGATAATGATGACATGGAGGAAGATCCAGAAGAGGACGAAGAAATGGACAATTCAACTCGCAATGATTCATCCAATGAGGCAAGCCTCCTATCTAATGATGAAGATGAGAAGAGGTCTGAAGCAAATGAAGAGGAGAAGGTTAAACCAAATGCGAAGCCTGAAGAAACAGCAGCAAACGAACAAAACGAAGGTGAAGAGTTGTCAAAGAAACCAGAAGCAACAGCCTCTGAGACAAAGATGATTGTTGATAACGAAGAATCAAAAACAAAAGCTGCCAAGCCAGAGACAAAGAAGAAAGAAGTTTCTTCTCTGAAGGAGGTTGTTGTCGATAAAGAGCTGCTACAGGCTTTTAGATTTTTTGACCGGAATCGAGTCGGCTATATAAGGGTTGAAGATATGAGGTTGATCGTTCACAACTTGGGAAAGTTTCTTTCTCACAGGGATGTGAAGGAACTGGTGCACAGTGCATTGCTCGAGAGCAGCACTGGAAGAGACGACCGGATTCTCTATAATAAGCTGGTACGAATGCCGCAAATTTGA 4158 41.87 MYSSRGSGAYGQQSYSGQSVYGQNMGGVYSGSSVGGHDNGSHHSLSSRHASMLGTSQEADASAYRGHSSTTTNYGGQYSSLYSSASLGGTTQVPPMSVKGSGSSVLEGRGAYASAIPNSPKFSSSEYVSSSNHGYGQKTDPFFSEKVPEYPTLERRQYSERQSTYIPRDMQNEQTGRYLDSASFGHQRHSDMYDRIDPVPLLRQEQLLKVQSLQSSTHDGNARQNDYLAARTTVSRHSAQEVVPYGGRVDADPRSISALNTSYSGQRTPSILGVAPRRDVDELLYSQSSSNPGYGVSLPPGRDYASGKGLHGTSLESDYSGGILSRGGHSRIDDRKDEKAGYLREFELREEERRRERIRVREKERDREKERERESERERERERERERERERERERDRDRDRERDKERERERERLLVRQKLRERENKRGIEIRRERTPPRASRDRRGSSLTKEGKLLRRDSPYHEALHRRHSPIKEKRREYVCKVYSYNFVDVERDYLSIDKHYPRLFIPPEFSKVVMNWPKEELKLSIHTPVSFEHDFIDEGSGDASKEPRFDVSAVDSAKSEHVNVVWNAKIVLMSGLSRNALEDLSSERSQEDRIPHICNILRFAVLKKDHAIMAIGGPWKSDDGNAPSIDGSSLFQTALRYAKDVAQVDLQNCLHWNRFLEIHYDRLGKDGLFSHKEITVLFVPDLSDCVPSLEMWREQWLAHKKAIADRERQLSKEVYKKIQEKMEKNQESLSSKPDGVEDKEKNSKDVNKNSTEKNDDGSDKNLDKKVMGEKCVEEEDIEKKKEEVAVGNVKKGKKKVIKKVIKQKVKIGDAAINKNDEQGGKENTEKNLGSDIAVTATQDESLADPTKVKTFVRKKIVKKVPVEKTTDGENKGSQLGSKDENKDSSEDKKDDPNSVVAVKDNAVKTTVKKKVIKRVPKRKVSEVKSNIGGVDDNVDGNKDETDVAKDMAENKMDLPMGEESLDAKKTEKKLAPETKSKGDKDEKGDENKVSSVPKSANEVDRQKKAQNGGNNGDAEQSKDGEKPKDGKDEIGKDGKNESRGSKEVKEKKSVDPPRHPGFVLRTKGSKDSKLRSTSLSLDSLLEYTDKDTDESTFELSLFAESLYEMFQYQMGCRIFTFLQRLRLKFVMKRNERKRQRLEMDQENDKKSSPKRQKIDESPAEKQSTTSTVEGSSQPDNEKTEVKQSSPTDHVDETMRENEIDNDDMEEDPEEDEEMDNSTRNDSSNEASLLSNDEDEKRSEANEEEKVKPNAKPEETAANEQNEGEELSKKPEATASETKMIVDNEESKTKAAKPETKKKEVSSLKEVVVDKELLQAFRFFDRNRVGYIRVEDMRLIVHNLGKFLSHRDVKELVHSALLESSTGRDDRILYNKLVRMPQI 1385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 37232415 37241146 + Bma023680.1 Bma06g00700 84202

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00700 1385 Pfam BURAN domain 491 578 IPR045354 -
Bma06g00700 1385 SUPERFAMILY EF-hand 1317 1362 IPR011992 -
Bma06g00700 1385 Pfam DBC1 599 716 IPR025954 -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 26 75 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 1022 1075 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 835 851 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 1236 1279 - -
Bma06g00700 1385 Gene3D - 1316 1381 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 866 1079 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 728 773 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 361 403 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 1204 1223 - -
Bma06g00700 1385 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 383 832 IPR025224 GO:0006355
Bma06g00700 1385 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 825 1382 IPR025224 GO:0006355
Bma06g00700 1385 PANTHER CCAR1 HOMOLOG 383 832 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 1166 1187 - -
Bma06g00700 1385 Pfam LAIKA domain 1060 1125 IPR045353 -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 116 144 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 1188 1203 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 1285 1307 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 815 831 - -
Bma06g00700 1385 PANTHER CCAR1 HOMOLOG 825 1382 - -
Bma06g00700 1385 PANTHER CCAR1 HOMOLOG 1 397 - -
Bma06g00700 1385 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1 397 IPR025224 GO:0006355
Bma06g00700 1385 MobiDBLite consensus disorder prediction 1141 1307 - -
Bma06g00700 1385 Coils Coil 353 397 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 1141 1165 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 940 996 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 880 902 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 815 854 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 428 471 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 287 335 - -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 997 1021 - -
Bma06g00700 1385 ProSiteProfiles EF-hand calcium-binding domain profile. 1314 1349 IPR002048 GO:0005509
Bma06g00700 1385 SMART DBC1_2 597 722 IPR025954 -
Bma06g00700 1385 MobiDBLite consensus disorder prediction 117 138 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00700 K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 - qsu:112005584 858.596
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00700 Bma-Chr6:37232415 Bma06g01634 Bma-Chr6:52466588 8.41E-29 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g936 . Blo16g01111 . . Bpe13g01405 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0569 Cone9ag0575 . . . . . . . . . . . Bma06g00700 . . . . . . . . Cpe07g00648 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007311 0 1 1 1 1 1 2 1 1 1 1 1 2 1 2 2 1 2 1 1 1 1 1 2 1 1 0 1 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma06g00700 Bma_Chr06 FPKM 4.322979 5.392125 7.690987 7.340143 8.246449 7.20398 8.117722 8.233818 8.465769 7.759532