Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00731 ACTTTTATAATGTCGGCTAATATATTTTGTAGGAGCAAAGTCCGAAAGAGAGGTCAAAAGAGGACGCGACAGCAAAGATTTGCGTTTCTAACCAAGAGTGACATCGATCATCTTGAAGATGGGTATAGATGGAGAAAATATGGACAGAAAGCTGTTAAAAATAGTCCATTCCCAAGCAGGAGTTACTACCGCTGCACAAACAGCAAATGTACTGTGAAGAAAAGGGTTGAGCGTTCATCGGAAGATCCCACCATTGTTGTAACCACGTACGAAGGTCAACATTGCCATTACACTGTAGGATTGTCTCGAAGCGGAGTCATTGGCCATGCAGCTTCATTTGATGGTCAGTTTCCGCCTCTCGTCCCCCATTTCTATTGCCCTGAACTTAACCTTCCAGCGGAGAATCCACTTATTGTGCCACAGTTACAGCCGGACAATCATCCAGACGGAATATCTAATGTCATTTCAGAGCCGACTTCGCAGCTTATTCCTCCTGATCAAGGATTACTAGGCGACATTGTGCCAAGTGGAATACGTAAAAGATGA 546 44.14 TFIMSANIFCRSKVRKRGQKRTRQQRFAFLTKSDIDHLEDGYRWRKYGQKAVKNSPFPSRSYYRCTNSKCTVKKRVERSSEDPTIVVTTYEGQHCHYTVGLSRSGVIGHAASFDGQFPPLVPHFYCPELNLPAENPLIVPQLQPDNHPDGISNVISEPTSQLIPPDQGLLGDIVPSGIRKR 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38296601 38297871 + Bma023716.1 Bma06g00731 84233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00731 181 Gene3D WRKY domain 25 92 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma06g00731 181 ProSiteProfiles WRKY domain profile. 33 99 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma06g00731 181 Pfam WRKY DNA -binding domain 39 96 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma06g00731 181 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 105 IPR044810 GO:0003700
Bma06g00731 181 SUPERFAMILY WRKY DNA-binding domain 31 97 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma06g00731 181 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 13 105 - -
Bma06g00731 181 SMART WRKY_cls 38 98 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00117 Bma06g00731 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00935 Bma-Chr2:49202332 Bma06g00731 Bma-Chr6:38296601 2.02E-46 dispersed
Bma06g00731 Bma-Chr6:38296601 Bma10g00947 Bma-Chr10:20283799 1.94E-43 dispersed
Bma01g01860 Bma-Chr1:68157586 Bma06g00731 Bma-Chr6:38296601 5.97E-25 transposed
Bma01g00117 Bma-Chr1:1178049 Bma06g00731 Bma-Chr6:38296601 1.56E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57471 PF03106 WRKY 1.50E-23 CL0274 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00731 - - zju:107428893 225.713