Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00739 ATGGAACCATCCCAAAGTGTGGTTCTAACTTCGGAGTTTCTGGAACATAATTGTATGAATAACATGGGAATGTCAAATGTAGGAGGATATGAAAATCATCGGCCTGATCTACCAGCTCTTAAGAAGCGAGGTCATGGATGCCGTTCTTGGATAAAAATTGATCAGGATGGAAACTCAACAATATTGGAACTTGATAAGGCCACAATAATGAGGCATTGCTCCCTACCTTCTAGAGATCTTCGACTTTTGGATCCTATGTTCATTTATCCTTCTACAATACTGGGACGAGAGAAGGCGATTGTGGTCAGTCTTGAACAGATCAGATGTATAATCACTTCAAATGAGGTTGTTTTAATGAACTCCTTAGATGGATGTGTTGTACAGTACAGGTCGGAGTTGTCCAAGCGCCTCCAGACTTCTAAATATGAATCAGATGGTTTACCCTTTGAGTTTAAAGCCCTGGAGCTGGCTTTGGAGCTCACTTGCATGTCTCTAGATACTCAGGTAGTGAAGGAACTGGAAATGGAGATATATCCTGGCCTGGATGAACTTGCATTATCCATTAACACCCTTAACCTAGAACGGGTCCGAAGATTTAAAGGTCATCTCCTTGGATTGACCCAGCGTGTTCAAAAGGTTCGTGATGAAATTGAACATCTCATGGATGATGATGGTGATATGGCTAAGATGTATTTGACTGAGAAAAAAGAAAGGTTAGAGGGTTATAACCCAAATGACCTTTCCATTCAAACAAAGCGCAGATCAAAGTTGCTATCCAAATCTGCTCCCGTCTCGCCAGTTGGATCAATTAATCGAACCCAAAAACTGGAAAGGACTTTTAGTGTTGTTGTTAGTTCAAGCAGACATGGAAGCTCGATAAGTTCATCCAACAATGGAGAAAACATTGATCAACTAGAAATGCTACTTGAAGCCTACTTTGTCGGCATAGACAACACCCTCAACAAGTTATTATCGCTCAAGGAATGTATTGATGATACTGAAGATTTAATCAACATTAAACTGGATAATGTTCAGAACCACCTGATAAAATTTCAGCTACTTCTCACAGCAGCTACTTTCATGGCTACAATCTTTGCTGCGGTTACTGCAATTTTCGGTATGAATTTCACGGCTCAAATCTTTGATTCTCCAACTGCATTCAACTGGGTTTTAGCTGTAACTAGTAGCTTTTGTGGATTATTGTTTTTATCTTTCCAGATTTATTTTAGACATAAGAAATCTTTCCCATTG 1251 39.65 MEPSQSVVLTSEFLEHNCMNNMGMSNVGGYENHRPDLPALKKRGHGCRSWIKIDQDGNSTILELDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVSLEQIRCIITSNEVVLMNSLDGCVVQYRSELSKRLQTSKYESDGLPFEFKALELALELTCMSLDTQVVKELEMEIYPGLDELALSINTLNLERVRRFKGHLLGLTQRVQKVRDEIEHLMDDDGDMAKMYLTEKKERLEGYNPNDLSIQTKRRSKLLSKSAPVSPVGSINRTQKLERTFSVVVSSSRHGSSISSSNNGENIDQLEMLLEAYFVGIDNTLNKLLSLKECIDDTEDLINIKLDNVQNHLIKFQLLLTAATFMATIFAAVTAIFGMNFTAQIFDSPTAFNWVLAVTSSFCGLLFLSFQIYFRHKKSFPL 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38397233 38399536 - Bma031294 Bma06g00739 84241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00739 417 CDD Mrs2_Mfm1p-like 50 413 IPR039204 -
Bma06g00739 417 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 417 IPR039204 -
Bma06g00739 417 PANTHER MAGNESIUM TRANSPORTER MRS2-5 5 417 - -
Bma06g00739 417 Gene3D - 38 121 - -
Bma06g00739 417 Gene3D Magnesium transport protein CorA, transmembrane region 126 348 - -
Bma06g00739 417 Gene3D Magnesium transport protein CorA, transmembrane region 355 413 - -
Bma06g00739 417 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 353 405 IPR045863 -
Bma06g00739 417 Coils Coil 203 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00739 Bma-Chr6:38397233 Bma12g00023 Bma-Chr12:735368 1.23E-83 dispersed
Bma06g00739 Bma-Chr6:38397233 Bma13g00660 Bma-Chr13:16386481 9.81E-155 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00739 K16075 - zju:107429067 540.806