Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00744 ATGAACTCAGAGGAGAAGGCTACAATGGAGATCGTTCCACCTTCTGAACATCTCTGCTATGTCCGATGCAACTTCTGCAACACTATTCTTGCGGTTGGGATTCCATGCAAACGTTTGCTGGATACAGTGACAGTGAAGTGCGGCCATTGCAGCAACCTTTCTTTTCTGAGCACTAGACCTCCATTACAAGGCCAATGCCTTGATCATCCATTGTCTCTTCAGACGCAAGTATTTTGCAAAGGCCAGCCTTCATCATCGCCCTCTTCCTCGTCTAGTGAGCCATTATCACCCAAAGCTCCATTTGTGGTCAAACCTCCTGAGAAGAAGCACAGAATTCCATCTGCATACAATCGTTTCATGAAAGAGGAAATACAGCGTCTAAAGGCAGCCAACCCTGAAATACCTCACCGAGAAGCATTCAGCAAAGCAGCAAAAAGTTGGGCGAGGTACATTCCAAACGCACCAGGAGGATCAAGCTCTGCTGGAATGAGCAACAATGAGTGA 504 47.02 MNSEEKATMEIVPPSEHLCYVRCNFCNTILAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPLQGQCLDHPLSLQTQVFCKGQPSSSPSSSSSEPLSPKAPFVVKPPEKKHRIPSAYNRFMKEEIQRLKAANPEIPHREAFSKAAKSWARYIPNAPGGSSSAGMSNNE 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38621157 38623961 - Bma023734.2 Bma06g00744 84246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00744 167 PANTHER PROTEIN CRABS CLAW 7 161 - -
Bma06g00744 167 MobiDBLite consensus disorder prediction 78 109 - -
Bma06g00744 167 MobiDBLite consensus disorder prediction 78 96 - -
Bma06g00744 167 Gene3D High mobility group box domain 91 153 IPR036910 -
Bma06g00744 167 SUPERFAMILY HMG-box 94 148 IPR036910 -
Bma06g00744 167 Pfam YABBY protein 14 150 IPR006780 GO:0007275
Bma06g00744 167 PANTHER PROTEIN YABBY 6-RELATED 7 161 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00744 Bma14g01716 CCT
Bma06g00744 Bma14g01716 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00744 Bma-Chr6:38621157 Bma12g00169 Bma-Chr12:2310453 3.56E-42 dispersed
Bma06g00744 Bma-Chr6:38621157 Bma14g00033 Bma-Chr14:456429 3.93E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57473 PF04690 YABBY 6.80E-47 CL0114 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00744 K25796 - vvi:100261225 285.419