Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00747 ATGGATTTAGGTGGGAATGATAATTTTGAACCAGAAAACAGGACTGAGAATCCTATGAACTGTTCACCAAGCCTGTCCTCTGGCTGGCCATTCGGTGGAGACCACCTTACAAACACGGTGATGGGATTGGCCAACCCGGCGAATTCCTCTGGCAAAGAGGATCTAATTCTACCTTCTTGTTCATCGGCTTCAATGGTTGATTTTTTTGGTCCAAACTTCAATGGTGGATTTCTTGATGTCTATAATAACTTCAATTCTTCAAACCTGGTTGGAATAAGCAGAGATAGTGCAGCTTCTTTGAGAATTGTTGATAGAACTCTTGATATGAGTTGGAACCCACCAAATCAAATGATGAAAGGAATTAATTTATCGAATTTTATTCACCCGAGCTTACCTCAATTTCCAGCCGATTCTGCATTCATCGAGCGAGCAGCTAGATTATCTTGCTTCAATGGTGGAAATCTCATGGAAACAGCTTGTCCTTTCAGCGTTCCTCAACCTATGGCTCTTTATTCTAAGAGTTTGGTGATTCCAGGCAATCAAGAATTAACAGCCATTAATGGGATGAGATCAGATACCATGGGACATCCTCAAAAACATGAGAATAGTCATATAGGTGAAGTCTCTATGGATGTTTGCTTGGAGGATGGAACTAACAGTCCTAAGAATGAAGGACAAAATGAGAACCATTTGAGATCTCATGATGAAGAAAAACAATGTATTGGGGGGTCGGAAGATGAAATGAGTGGTAGTGGTCAAGATGAACCATCTATGGTGGAGGGTAGATGTAAAGAGTCTTCTGGCAACAAAAAAAGGAAAAGGAGTAGGCAGAGTAACGGACTTGATCAAGCCAAAGAAGCTGCACAACAAACCAGCGAATCTGCAAGGGATGATAATGAGATTCAACACAAGAACGATCAAAACCCATGTTCGGTTAACAACAAATCTACTGGAAAACAAGGATCTCAAGCCTCCGAACTCCCCAAGGAAGAATACATTCACGTTAGAGCACGAAGAGGTCAGGCAACAAATAGCCATAGTCTTGCAGAAAGGGTTAGAAGGGAAAAGATCAGTGAACGAATGAAGTTTCTTCAAGACCTTGTACCTGGTTGCAGCAAGGTCACTGGCAAGGCGGTAATGCTAGATGAAATTATAAATTATGTACAGTCGCTGCAACGACAAGTAGAGTTTTTGTCAATGAAACTTGCCACTGTCAATCCACGGATAGATTTCAGTATTGATGGTCTTGCGAAAGATATACTTAAAACAAGGGCTGGTCCATCATCTTCGTTGGGCTGCTCACCAGACATTTCTATGGCTTATCCTCCATTACAACTTTCTCAACAAGGGCTTCTTTCCTGGGGTGTTAATGGGATGGGTGGCTCTTCTGAAATTCTCCGAAGAACACTCGCTTCCCAGTTGACACCACTGACTGGTGGATTTAAAGAGCCTTCTCAGCCATCAAATGTGTGGGAGGATGATCTCCACAATGTTTTCCAGACGAGCTTTGGAACTTCAGCTCCTTCCAATACCCAAAATGTTGATGGTTCTCTCCCTCCAGGTGATATGAAAGTTGAACTTTAA 1584 42.23 MDLGGNDNFEPENRTENPMNCSPSLSSGWPFGGDHLTNTVMGLANPANSSGKEDLILPSCSSASMVDFFGPNFNGGFLDVYNNFNSSNLVGISRDSAASLRIVDRTLDMSWNPPNQMMKGINLSNFIHPSLPQFPADSAFIERAARLSCFNGGNLMETACPFSVPQPMALYSKSLVIPGNQELTAINGMRSDTMGHPQKHENSHIGEVSMDVCLEDGTNSPKNEGQNENHLRSHDEEKQCIGGSEDEMSGSGQDEPSMVEGRCKESSGNKKRKRSRQSNGLDQAKEAAQQTSESARDDNEIQHKNDQNPCSVNNKSTGKQGSQASELPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRIDFSIDGLAKDILKTRAGPSSSLGCSPDISMAYPPLQLSQQGLLSWGVNGMGGSSEILRRTLASQLTPLTGGFKEPSQPSNVWEDDLHNVFQTSFGTSAPSNTQNVDGSLPPGDMKVEL 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 38766134 38768781 - Bma023736.1 Bma06g00747 84249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00747 527 SMART finulus 347 397 IPR011598 GO:0046983
Bma06g00747 527 Pfam Helix-loop-helix DNA-binding domain 344 392 IPR011598 GO:0046983
Bma06g00747 527 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 341 391 IPR011598 GO:0046983
Bma06g00747 527 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 339 410 IPR036638 GO:0046983
Bma06g00747 527 MobiDBLite consensus disorder prediction 214 328 - -
Bma06g00747 527 MobiDBLite consensus disorder prediction 227 243 - -
Bma06g00747 527 MobiDBLite consensus disorder prediction 502 517 - -
Bma06g00747 527 CDD bHLH_AtBPE_like 331 416 - -
Bma06g00747 527 Gene3D - 338 410 IPR036638 GO:0046983
Bma06g00747 527 PANTHER TRANSCRIPTION FACTOR BHLH49 43 526 - -
Bma06g00747 527 MobiDBLite consensus disorder prediction 1 21 - -
Bma06g00747 527 MobiDBLite consensus disorder prediction 502 527 - -
Bma06g00747 527 MobiDBLite consensus disorder prediction 305 324 - -
Bma06g00747 527 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 43 526 IPR024097 GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00138 Bma06g00747 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01005 Bma-Chr2:51132248 Bma06g00747 Bma-Chr6:38766134 4.98E-29 dispersed
Bma03g00554 Bma-Chr3:4562973 Bma06g00747 Bma-Chr6:38766134 3.42E-51 dispersed
Bma06g00747 Bma-Chr6:38766134 Bma06g01401 Bma-Chr6:50785189 5.50E-60 dispersed
Bma01g02229 Bma-Chr1:79292929 Bma06g00747 Bma-Chr6:38766134 1.38E-48 transposed
Bma01g02239 Bma-Chr1:79519283 Bma06g00747 Bma-Chr6:38766134 3.90E-48 transposed
Bma01g00138 Bma-Chr1:1326386 Bma06g00747 Bma-Chr6:38766134 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57474 PF00010 HLH 6.70E-06 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00747 - - jre:108989406 567.385