Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00768 ATGAATTATTCGGCGAAAATGCAGGAAATGGCTATGGAGATGGATTTCAAAAAGTATGTGGAGGCGTTAAAAGAAGAACGCCGGAAAATTACTGTTTTCCAGCGCGAGCTGCCGCTCTGTTTAGAGCTTATCACTCAAGCGATTGAGTCTTGTACGCAGCAGTTATCGGGGACGACGACGGAGTGTTTTAATGGAGGACTATCTGATTGCTCCGAGCAAACTTCCGGTGAATGCCCGGTGCTGGAGGAATTTATTCCGGTCAAAAAGGGTTTATCTTCAGAATTTTTGGATGAAGAGAGAGAATCTCTAAAAATGAGAAAGGAGAACAAAAATAGCGAGAAGAAGCAATTGGGTCAATCGGATTGGCTTAAATCAGCTCAGCTATGGAATCCAGATCCTGACTGGTTTTGCTTTTCGCAGGATTTACCGAAGAAGACGACGGTTGTGGAGGTGAAGAAAAATGGCGGAGCTTTCCAGCCATTCCACAGAGAAAAAACCACAGGAAAAACAAACTCGCCCGTCGAAAATGGGCCGGCGGCGACTTTAATTTGTACGGCGGAAACAGCTTTCCAAAGCAGCACCAAACGAGAAGAGAAAGACGAACTGGGTAAAAGAAAGCTCCGGCGGTGCTGGTCGCCGGAGTTGCATCGCCGATTCTTGAGTGCCCTTCAACAGCTCGGCGGCTCACATGTGGCGACGCCAAAGCAGATTAGGGAGCTAATGAAAGTGGATGGTCTAACTAACGATGAAGTTAAAAGCCATTTACAGAAATATCGTTTGCACACTAGAAGGTCAAGTCCTGTACACAACAATGGCGTCAAACAGTCACCGCAGTATGTGGTAGTGGGCGGAATATGGGTGCCGCCGTCGGAATACGCAGTGGCGCCGGCGACAACCGTCGCCGGAGAGGGCAACGAATTCTACGTAGCTCCAACCACAGTTTCACAAGGTGGCCAAGGGTCCGCCATTAAAAGGCCACAGCCAAAGCGATTGGTTCAGTCTAGCACGGAAGGAAGAAGGATCAGCCACGGCGGAGAAGACGGGATAGAAGGCGGTCGTCATTCTAATTCTCCGGCGACGTCGTCTTCCACTTACGCTTCCACAGCTTCCCCTGGGCTTTGA 1122 49.38 MNYSAKMQEMAMEMDFKKYVEALKEERRKITVFQRELPLCLELITQAIESCTQQLSGTTTECFNGGLSDCSEQTSGECPVLEEFIPVKKGLSSEFLDEERESLKMRKENKNSEKKQLGQSDWLKSAQLWNPDPDWFCFSQDLPKKTTVVEVKKNGGAFQPFHREKTTGKTNSPVENGPAATLICTAETAFQSSTKREEKDELGKRKLRRCWSPELHRRFLSALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRSSPVHNNGVKQSPQYVVVGGIWVPPSEYAVAPATTVAGEGNEFYVAPTTVSQGGQGSAIKRPQPKRLVQSSTEGRRISHGGEDGIEGGRHSNSPATSSSTYASTASPGL 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 39463142 39464593 - Bma023765.1 Bma06g00768 84270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00768 373 Coils Coil 93 113 - -
Bma06g00768 373 MobiDBLite consensus disorder prediction 354 373 - -
Bma06g00768 373 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 15 368 IPR044787 GO:0003700|GO:0006355
Bma06g00768 373 Gene3D - 205 263 - -
Bma06g00768 373 MobiDBLite consensus disorder prediction 312 373 - -
Bma06g00768 373 MobiDBLite consensus disorder prediction 312 339 - -
Bma06g00768 373 PANTHER TRANSCRIPTION FACTOR HHO2 15 368 - -
Bma06g00768 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 263 IPR017930 -
Bma06g00768 373 SUPERFAMILY Homeodomain-like 204 264 IPR009057 -
Bma06g00768 373 Pfam Myb-like DNA-binding domain 208 259 IPR001005 -
Bma06g00768 373 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 206 261 IPR006447 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00768 Bma14g01699 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00768 Bma-Chr6:39463142 Bma12g00476 Bma-Chr12:13473861 1.20E-37 dispersed
Bma14g01699 Bma-Chr14:36135175 Bma06g00768 Bma-Chr6:39463142 3.52E-116 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57477 PF00249 Myb_DNA-binding 1.50E-06 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00768 - - vvi:100257723 357.066