Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00792 ATGGCCACAGACGGTTTCTCGGACGCCAATCTCCTCGGACAAGGCGGGTTCGGCTATGTCCACCGAGGAGTGCTTCCTAACGGAAAGGAAGTCGCTGTAAAGCAGTTGAAAGCCGGGAGTGGGCAGGGAGAACGAGAATTCCAAGCCGAAGTTGAGATAATTAGTCGAGTTCATCATAAACATCTCGTCTCATTGGTCGGATATTGCATTACTGGGTCCCAACGATTGCTTGTCTACGAATTCGTTCCGAACAATACGTTGGAATTCCATTTACACGGTCATGGAAGGCCGACTATGGAATGGCCTACGAGACTGAAAATGGCGTTAGGATCTGCAAAAGGACTGGCTTACCTGCACGAGGATTGCCATCCGAAAATCATTCATCGTGACATCAAGGCATCAAATATTTTATTGGATTTCAAGTTTGAGGCTAAGGTCGCGGACTTCGGACTTGCCAAGTTTTCGTCTGATGTCAACACCCATGTCTCGACCCGAGTGATGGGAACTTTCGGATATCTGGCTCCAGAATACGCGTCGACTGGGAAATTGACCGAAAAATCAGATGTTTTCTCGTTTGGGGTTATGCTTTTGGAACTAATCACTGGTCGAAAACCCGTGGATACATCGGACGCGTTCATGGAGGATAGTTTAGTAGATTGGGCGAGACCTTTACTCAGCCGAGCACTGGAAGACGGAAATCTCGATGCTTTGGTCGATCCAAAGCTGCAAAATAACTACAATCACAATGAAATGTCTCGAATGGTTGCCTGTGCGGCTGCTTCGGTTCGTCATTCTGCTAGGCGTCGACCGCGGATGAGCCAGGTGGTTCGAGCTCTGGAAGGAGACGCCTCTCTCTCCGATCTAAACGAAGGGATCCGGCCTGGACACAGCACGGTTTACAGCTCCCATGGAAGCTCGGATTACGACACCAACCAATACAACGAAGACCTGAAAAAGTTCAGGAAAATGGCGTTGGGTAGCCAGGAGTACGGAGCCAGCAGTGAATACAGCGGACCGACCAGCGAGTACGGCTTGAACCCATCTGGGTCGAGCAGCGAAGCGCAAATCACCCGAGAAATGGAGATGAGAGGGGTGAAGAAAGACAGTCAAGGCTTCAATGAAAGCTCTTGA 1131 49.87 MATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGHGRPTMEWPTRLKMALGSAKGLAYLHEDCHPKIIHRDIKASNILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASTGKLTEKSDVFSFGVMLLELITGRKPVDTSDAFMEDSLVDWARPLLSRALEDGNLDALVDPKLQNNYNHNEMSRMVACAAASVRHSARRRPRMSQVVRALEGDASLSDLNEGIRPGHSTVYSSHGSSDYDTNQYNEDLKKFRKMALGSQEYGASSEYSGPTSEYGLNPSGSSSEAQITREMEMRGVKKDSQGFNESS 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 40568896 40570682 - Bma023805.1 Bma06g00792 84294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00792 376 MobiDBLite consensus disorder prediction 329 376 - -
Bma06g00792 376 MobiDBLite consensus disorder prediction 295 311 - -
Bma06g00792 376 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 354 - -
Bma06g00792 376 Gene3D Transferase(Phosphotransferase) domain 1 82 290 - -
Bma06g00792 376 ProSiteProfiles Protein kinase domain profile. 6 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00792 376 ProSitePatterns Protein kinases ATP-binding region signature. 12 34 IPR017441 GO:0005524
Bma06g00792 376 MobiDBLite consensus disorder prediction 330 357 - -
Bma06g00792 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Bma06g00792 376 SMART serkin_6 6 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00792 376 Pfam Protein tyrosine and serine/threonine kinase 11 278 IPR001245 GO:0004672|GO:0006468
Bma06g00792 376 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 354 - -
Bma06g00792 376 SUPERFAMILY Protein kinase-like (PK-like) 2 279 IPR011009 -
Bma06g00792 376 MobiDBLite consensus disorder prediction 286 311 - -
Bma06g00792 376 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00187 Bma-Chr1:1684343 Bma06g00792 Bma-Chr6:40568896 0 dispersed
Bma06g00792 Bma-Chr6:40568896 Bma11g00518 Bma-Chr11:6483183 0 dispersed
Bma06g00792 Bma-Chr6:40568896 Bma07g00491 Bma-Chr7:5987505 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66545 PF07714 PK_Tyr_Ser-Thr 9.90E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00792 - - twl:120005659 675.626