Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00881 ATGAACCCCGACCTCGAACTCACTCTCCCTCCTCCCAACGGAAAGGAGTCTGATGAATCGGAAAACTTGGAGACTGCAACCGGCGAAAGTATCGTCCAATCGATTAACCTCAACCTCAAACTCACTCTCCCTATTTCCGACGAAGCTTCATTGGCCACTTTTTTAACTAATAGTGGTACATTCATGGACGGTGATCTTCTCATCAATCGGGAGGGAGTTCAAATTGTCTGTCAGACTCAGAAAGAAGCTGAAAATTCATGTCAACTCAACCCCTCAGACAGCCAGTGGAGTTTGGAAGACATGGATACAGTTAAAGTCATCGGAAAAGGAAACGGCGGAGTTGTTAAGCTGGTGAAGCACAAAGCCACCGGCCAGTTTTTCGCATTGAAGGTTATTCAAATGAAGATCGAGGAGAGTTATCGGAAACAGGTAGCGAGGGAACTGAAAATTAATCAGTCAGCTCGAAGCCCATATGTGGTGGTCTGTTATCAGTCTTTCTACTACAATGGAGTCATTTCAATTATCTTAGAGTACATGGATGGAGGGAGTCTAGCAGATTTTCTGAAACAAGTTAAGTCGATTCCTGAGGAATATCTTGCTGCAATATGTAAACAGGTGCTGAGGGGACTTTTGTACCTTCACCATGAAATGCACATAATTCACAGGGACTTGAAGCCTTCAAATCTGCTTATAAATCACAAAGGAGAAGTCAAGATTAGTGATTTTGGTGTGAGCAGAATAATGGCAAGCACCTCTGGACAGGCCAATACCTTTGTTGGAACATACAAGTACATGTCTCCAGAGAGGATTGATGGAGAAAGATATGACAAGAAAAGTGATATTTGGAGCTTGGGACTGATTTTACTGGAGTGTGCAATTGGTCAGTTTCCTTATTCTCCACCAGAGGAAGGTGGAAGCTTGGATAACTTCTTTGATGTTATGCAAGTCATTGTTAATGGACCTCCTCCTTCTGCTCCTTCTCCCGGATTTTCTCCGCAGTTCTGCTCCTTCATTTCCGCATGCTTAGAAAAAGAGCCGAAAGACAGACTCTCGGCTCGTGAGCTTATGGTGCATCCTTTTCTGAATGCATATGAAGACTTGGATGTGGATCTATCATCGTACTTCGCAGACGCCGGATCTCCATTTCCACCCTCTTAG 1158 44.04 MNPDLELTLPPPNGKESDESENLETATGESIVQSINLNLKLTLPISDEASLATFLTNSGTFMDGDLLINREGVQIVCQTQKEAENSCQLNPSDSQWSLEDMDTVKVIGKGNGGVVKLVKHKATGQFFALKVIQMKIEESYRKQVARELKINQSARSPYVVVCYQSFYYNGVISIILEYMDGGSLADFLKQVKSIPEEYLAAICKQVLRGLLYLHHEMHIIHRDLKPSNLLINHKGEVKISDFGVSRIMASTSGQANTFVGTYKYMSPERIDGERYDKKSDIWSLGLILLECAIGQFPYSPPEEGGSLDNFFDVMQVIVNGPPPSAPSPGFSPQFCSFISACLEKEPKDRLSARELMVHPFLNAYEDLDVDLSSYFADAGSPFPPS 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 43614687 43617953 + Bma023938.2 Bma06g00881 84383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00881 385 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Bma06g00881 385 Gene3D Phosphorylase Kinase; domain 1 71 180 - -
Bma06g00881 385 SUPERFAMILY Protein kinase-like (PK-like) 94 366 IPR011009 -
Bma06g00881 385 PANTHER MAP KINASE KINASE 33 380 - -
Bma06g00881 385 ProSiteProfiles Protein kinase domain profile. 101 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00881 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bma06g00881 385 Pfam Protein kinase domain 103 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00881 385 MobiDBLite consensus disorder prediction 1 23 - -
Bma06g00881 385 CDD PKc_MAPKK_plant_like 99 365 - -
Bma06g00881 385 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 33 380 - -
Bma06g00881 385 SMART serkin_6 101 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g00881 385 Gene3D Transferase(Phosphotransferase) domain 1 181 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00211 Bma-Chr1:1878817 Bma06g00881 Bma-Chr6:43614687 3.69E-131 dispersed
Bma06g00881 Bma-Chr6:43614687 Bma11g00589 Bma-Chr11:8789921 3.65E-141 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66549 PF00069 Pkinase 2.00E-70 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00881 K20603 - cit:102625262 502.671