Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g00885 | ATGGAAAGAGAAGAAGATTTGAGGAAAATTGCAGCTGAAGAAAAAGCTAAGCATTTAGAAGCCATGAAGGCACTAGAGGAAGCAAAAGTTTTACTGGCTAAAGAGGCATATGAGAGGCAGTTGGCTGAACAGAATGCCCGAAAAGTATCCTTGGAAAAGCAAAGAATTGTTGATGCTCTAATCTCTTCTGATAAAAGGTACAGAAGGTATACTGGGGAGGAAATAGAAATTGCAACGGATTTCTTCAGCGAGAGTAATATGATTGGTCAGGGAGGATATGGGAAGGTCTATAAATGCTATCTTGATGGTACACTAGTGGCTGTTAAGGTTCTTCAACCTGGTGAATTTGACAAGAAAAATGAGTTTCTGAAAGAGGTTGAAGTTTTAAGCCAAATACGCCATCCACACGTGGTTTTACTCCTCGGAGCTTGTCCAGAGAGAGGTTGTCTGGTTTATGAATTCTTGGAAAATGGAAGTCTGGACGAGTATATCTTGCAGCAGAGGAGGAAACCACCACTTCCATGGCTTGTTAGATTCAGGATAATTCATCAAGTAGCTTGTGGACTTTCTTTCTTACACAACTCAAAGCCGGAACCTATAATACATCGAGATCTAAAGCCGGGAAATATCTTGTTGGACAGAAACTATGTTGTCAAAATTGCAGATGTTGGACTGGCTAAAATCACTGGAGAGATAGTGCCTGATAATATAACAGAATATAAAAATTCTATTATATTTGGTACACTTCACTACATGGACCCCGAGTATCAGAGAACTGGCACGGTTCGTCCAAAATCTGATTTATATGCTTTTGGTGTAATAGTTCTCCAAATGTTGGCAGCCCGTCGTCCTCACGGCTTAATTTTAGCGGTAGAGAATGCTATTTCAAGTGGGTCCTTGGCAGATATTTTAGATAAGTCAGTTTCAGATTGA | 933 | 40.09 | MEREEDLRKIAAEEKAKHLEAMKALEEAKVLLAKEAYERQLAEQNARKVSLEKQRIVDALISSDKRYRRYTGEEIEIATDFFSESNMIGQGGYGKVYKCYLDGTLVAVKVLQPGEFDKKNEFLKEVEVLSQIRHPHVVLLLGACPERGCLVYEFLENGSLDEYILQQRRKPPLPWLVRFRIIHQVACGLSFLHNSKPEPIIHRDLKPGNILLDRNYVVKIADVGLAKITGEIVPDNITEYKNSIIFGTLHYMDPEYQRTGTVRPKSDLYAFGVIVLQMLAARRPHGLILAVENAISSGSLADILDKSVSD | 310 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 43733074 | 43734341 | - | Bma023944.1 | Bma06g00885 | 84387 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g00885 | 310 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 34 | 1 | 310 | - | - | |
Bma06g00885 | 310 | Pfam | Protein tyrosine and serine/threonine kinase | 85 | 280 | IPR001245 | GO:0004672|GO:0006468 | |
Bma06g00885 | 310 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 310 | - | - | |
Bma06g00885 | 310 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 200 | 212 | IPR008271 | GO:0004672|GO:0006468 | |
Bma06g00885 | 310 | SMART | serkin_6 | 82 | 309 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g00885 | 310 | ProSitePatterns | Protein kinases ATP-binding region signature. | 88 | 109 | IPR017441 | GO:0005524 | |
Bma06g00885 | 310 | Coils | Coil | 8 | 29 | - | - | |
Bma06g00885 | 310 | Gene3D | Phosphorylase Kinase; domain 1 | 61 | 154 | - | - | |
Bma06g00885 | 310 | PIRSF | ILK | 4 | 293 | - | - | |
Bma06g00885 | 310 | PANTHER | OS02G0152300 PROTEIN | 1 | 310 | - | - | |
Bma06g00885 | 310 | SUPERFAMILY | Protein kinase-like (PK-like) | 65 | 286 | IPR011009 | - | |
Bma06g00885 | 310 | Coils | Coil | 34 | 54 | - | - | |
Bma06g00885 | 310 | ProSiteProfiles | Protein kinase domain profile. | 82 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g00885 | Bma-Chr6:43733074 | Bma09g00971 | Bma-Chr9:49228083 | 1.96E-101 | dispersed | |
Bma06g00882 | Bma-Chr6:43637515 | Bma06g00885 | Bma-Chr6:43733074 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66551 | PF07714 | PK_Tyr_Ser-Thr | 6.50E-40 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g00885 | - | - | tcc:18588349 | 483.411 |