Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00936 ATGCTCTCAAGATCCTCTTTAACCTCATTAAATCTAACGTCATTTGATGATTTTCCGGCTCTGAATCGGATTCCAAGAGTAATGACTGTTTCCGGCGTTTTATCCGGATTCGAAGCTGAAGAAGACGACGCTTCCAGCGAGAGATTATCTTCGCCGGAGCGGCGAATTGTCGTTTCGAACCAGTTGCCGATTCGAGCTCGACGGGATGTGGAAACTGGAAAATGGGAGTTTGAGTTTGATTCCGATAGCCTGGTTTTGCAGCTGAAAGATGGGTTTTCTCCGCAGGTCGAGGTGATGTACGTCGGCTCTCTCAACGCCGATATCGACGTTTCCGACCAAGATCGGGTTTCTCAACTTCTCCTTGCGAAATTCCGGTGTGTTCCGACGTTCTTACCATCTGAAATTCAAAATAAGTTCTATCATGGGTTTTGCAAGCATTATCTATGGCCTCTGTTTCACTACATGTTACCTTTATCTCCGGGGAACGGCGACCAGTTCAGCAGGGAAAATTGGCAAGCTTACGTATCGGCAAACAAGATTTTCGCCGACAAAATCATGGAGGTGATTAATCCGGAAGATGATTACGTCTGGATTCATGATTATCATCTAATGATTTTGCCAACCTTTTTGAGGAGAAGGTTTCACCGGATTAAGCTCGGATTCTTCTTGCACAGTCCGTTTCCATCGTCGGAAATTTACCGATCCCTTCCGGTTCGAGAGGAGATCTTGCGGGGCCTTTTGAACTCCGATCTGATAGGGTTTCACACGTTCGATTACGCCAGACATTTTCTCTCTTGTTGCAGTAGAATGTTGGGTCTTGATTATGAATCGAAACGGGGCTACATCGGACTAGATTATTACGGCAGAACCGTCAGCATCAAGATCCTTCCGGTCGGAATTCATATGGGACAGCTTGAATCTATTCTTTCTCTCTCTTCCACTGCTGACAAGGTCAAGGAACTGAGAGAGAGATTCAAAGGGAAAATCGTCATGTTGGGGGTCGACGATATGGATTTGCTCAAAGGAATTAGCTTGAAATTTCTTGCAATGAAGCAATTACTAGAACAGAGGACTGATTTAAGAGGAAAAGTTGTGTTGATTCAGATTACAAACCCGGCAAGAAGCCGAGGAAGAGATGTTCAAGACGTCGAAAATGAGATCAAATCCGAAGCTGATGAAATCAATCGGAAATTCGGCGATGAACAATACGAGCCAATAATTTTCATCAACGGCCCCGTCACAACCTTAGAAAAAGCCGCCTACTACGCTATTGCCGAATGCTGTGTAGTAAACGCTGTTAGAGACGGAATGAACTTAGTGCCATACAAATACACCGTATGCCGACAAGGCAATCCGGTCTCAGACAAAGCTTTATCAATGGACATATCGTCGCAGCCTCGGAAAAGTGTTCTGATCGTCTCGGAATTCATCGGATGCTCCCCTTCGTTAAGTGGAGCAATTCGGGTCAATCCGTGGAATATCGAGGCCGTCTCCGATGCGATGTATTCGGCGATTACAATGGGGGAGACTGAGAAAGGATTGAGACATGAAAAACATTACAAGTACATAAGTTCTCATGATGTATCGTATTGGGCGAGGAGTTTCGACCAAGATCTCGAAAGGGCTTGTAGGGATCATTACACAAAGAGGTGTTGGGGGATCGGATTTGGCTTGGGGTTTAGAGTCGTCGCGTTGGGACCTCATTTTCGGAAACTTACGGTCGATCATATCGTTTCGGCTTATAAGAAGACTAAAAATAGGTTGATTTTGCTGGATTATGATGGAACTATGACCCCAAATGGATCTGTGGATAAAGCTCCTAGCAGTGAAGTTATTTCTGTGTTGAATTGTCTCTGTAGTGACCCTACAAATGTGGTTTTTATTGTGAGTGGCAGAGGGAAAGATTGTCTGAGCAAATGGTTCTCTCCTGTTGAGAAACTGGGTATTTCAGCTGAACATGGCTACTTCACAAGGTGGTCTTGTGGACTTAAATGGGAGACTTGCTCTTTGCCCATGGACTTTGAATGGAAAAGAATGGCAGAGCCGGTAATGGCTCTTTACACAGAAGCCACAGATGGTTCATTCATTGAACAGAAGGAAAGTGCATTGGTTTGGCACCATCAAGAAGCCGACCCTCATTTCGGCCTATCACAAGCAAAAGAGCTTCTTGATCATTTAGAAAGTGTGCTCGCTAACGAGCCCGTCGTCGTGAAACGAGGGCAACACATCGTCGAAGTCAAACCGCAGGGAGTGAGCAAAGGGGTAGTGGTAAAGAGCCTAATCTCGTCTTTGGAGAAACAGGGAATATGTCCGGATTTCGTTATGTGCGTAGGAGACGATCGATCGGACGAAGATATGTTCGAGAGCATATCAAATTCGGCCACGGATCCGCCATTGCCGGCCACATCCGAGGTTTTTGCCTGCACTGTTGGTCAGAAACCAAGTATGGCAAAATACTATCTTGATGATACTTCTGAGGTCATTAGGTTGCTTCAAGGCCTTGCCATTTCTTCACAGCCCAAGCTACAGCCATTTGAATGA 2541 45.45 MLSRSSLTSLNLTSFDDFPALNRIPRVMTVSGVLSGFEAEEDDASSERLSSPERRIVVSNQLPIRARRDVETGKWEFEFDSDSLVLQLKDGFSPQVEVMYVGSLNADIDVSDQDRVSQLLLAKFRCVPTFLPSEIQNKFYHGFCKHYLWPLFHYMLPLSPGNGDQFSRENWQAYVSANKIFADKIMEVINPEDDYVWIHDYHLMILPTFLRRRFHRIKLGFFLHSPFPSSEIYRSLPVREEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVSIKILPVGIHMGQLESILSLSSTADKVKELRERFKGKIVMLGVDDMDLLKGISLKFLAMKQLLEQRTDLRGKVVLIQITNPARSRGRDVQDVENEIKSEADEINRKFGDEQYEPIIFINGPVTTLEKAAYYAIAECCVVNAVRDGMNLVPYKYTVCRQGNPVSDKALSMDISSQPRKSVLIVSEFIGCSPSLSGAIRVNPWNIEAVSDAMYSAITMGETEKGLRHEKHYKYISSHDVSYWARSFDQDLERACRDHYTKRCWGIGFGLGFRVVALGPHFRKLTVDHIVSAYKKTKNRLILLDYDGTMTPNGSVDKAPSSEVISVLNCLCSDPTNVVFIVSGRGKDCLSKWFSPVEKLGISAEHGYFTRWSCGLKWETCSLPMDFEWKRMAEPVMALYTEATDGSFIEQKESALVWHHQEADPHFGLSQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGVVVKSLISSLEKQGICPDFVMCVGDDRSDEDMFESISNSATDPPLPATSEVFACTVGQKPSMAKYYLDDTSEVIRLLQGLAISSQPKLQPFE 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 45237348 45240455 - Bma024008.1 Bma06g00936 84438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00936 846 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 544 - -
Bma06g00936 846 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 840 IPR001830 GO:0003824|GO:0005992
Bma06g00936 846 CDD HAD_TPP 588 829 - -
Bma06g00936 846 SUPERFAMILY HAD-like 587 834 IPR036412 -
Bma06g00936 846 Gene3D Glycogen Phosphorylase B; 46 306 - -
Bma06g00936 846 CDD GT20_TPS 54 540 IPR001830 GO:0003824|GO:0005992
Bma06g00936 846 Gene3D - 586 703 IPR023214 -
Bma06g00936 846 Gene3D - 715 843 IPR023214 -
Bma06g00936 846 TIGRFAM T6PP: trehalose-phosphatase 585 834 IPR003337 GO:0003824|GO:0005992
Bma06g00936 846 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 840 - -
Bma06g00936 846 Gene3D Glycogen Phosphorylase B; 307 524 - -
Bma06g00936 846 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 588 789 IPR006379 -
Bma06g00936 846 Pfam Trehalose-phosphatase 590 825 IPR003337 GO:0003824|GO:0005992
Bma06g00936 846 Pfam Glycosyltransferase family 20 54 540 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00936 Bma-Chr6:45237348 Bma14g01762 Bma-Chr14:37920255 0 dispersed
Bma01g00347 Bma-Chr1:2870672 Bma06g00936 Bma-Chr6:45237348 4.24E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00936 K16055 - pvy:116113190 1308.12