Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g00955 | ATGGATGTGTACGAATCAGCATTGTCAAGAAAGCATTCAGCCCAGGTGACGACTAGACTGCCATTAGTTCCAGCCGAAAAGAACAATGCAATCAGCACCAGGCGCGCTCCAACGAGGGAAGTTAGTTCTAGGTACAAATCACCTGCTCCATCAACGCCCTCTGGCCCTAGGCGTTGCGTATCACCACATACATCTAGAGCAGTGTCTGCTACTTCCCCCTTGGTTCAGAAAAGAGCCCAATCGGCAGAAAGGAAGCGGCCTTCCACGCCTCCATCCCCACCAAGTCCATCTACATCAGTCCATGATTTGTCCTTGGACACGTTAAGAAGAACATCGGTTGGTGGTCGACCGGAGAGCTTATGGCCATCCACTATGCGAAGTTTGAGTGTTTCATTTCAGTCTGATGCAATATCTGTTCCGGTTAGTAAGAAGGAAAAACCAGTCACGACAGCACCTCTTGATCGAACATTGAGGCCATCTTCAAATGTGGCTCATAAGCTGGGTGAAACTCCATCTGCCCCACGAAAGCCTACCCCAGAGAGAAAGAGAAGTCCTGTTAAAGGAAAGATTGTGCCTGATGAATCAGAAAATTCTAAGCCAGTGGATGGAGTACATAGCCGATTGTTAGCTCAACACAGATGGCCTAGAATTGGTGGAAAAGTGTCATCCAATCCATTAAGTAGAAGTGTTGATCTCACTGATAAACCAATCCGAAGTTTGAGTACATCACTTCCTGGAAATGGATCATATTCTTTGAGGAGAACAGCATCTGACTCTATTGGCAAATCTTTGCAAAAATCTATTAGTAATTCTAGTGAAAGCGTTAAAGTAGGCTGTGAAATATATTCAATGGATGGAAGTTTTCTTCCAGTTTCCGGGAAGCTCGTTTCTACTCGATCAGGAGACCGAGCAGCTATAAGTTCTGCAGTAAGATCTCATTTTTCGTCCGCACCGGGATCTCGTCTACCATCACCTAATAAAACTTCAGTCACACCGGCTTCAGTTAGTAGAGGAGTCAGTCCATCACGTTCAAGGCCATCAACTCCTCCACGTGGAATCAGTCCATCTCGAATAATGTCATCCAGTACTAGTCAGTCTAATAATTCAACTTCTGTGCTCACTTTCATTGCGGATGTGAAGAAAGGAAAAAAGGGAGCTAATCATATAGAAGATGCTCATCAGCTGAAGCTGCTGTATAATAGATGTTTACAGTGGAGATTTGCTAATGCGCAATCAGAGTCTGTACTTCATATTCAAGAAGTAACTGCAGAGGGAGCCTTATACAACGTGTGCAAGAGTACTCTCGATCTGTGGGATTCAGTAATCAGTAAAAGCATTAATCTCCAACAGCTGAAGCTAGATATTAAGTTGAAGTCAGTTTTGAACGATCAATTAGCCCATCTTGAAGAATGGGCTGTGCTTGAGAGAGACCATGTTGGTTCTTTATCAGGGGCGGTGGAAGACCTTGAGGCATGCACCCTCCGCATCCCAGTTACTGGAGGAGCAAAAGCAGATGTTGAATCTCTAAAAGGTGCCATCTGTTCAGCTGTGGACGTTATGCAAGCAATGGGATCTTCTATTTGCTCTTTGCTTTCAAGGGCGGAAGAAATGAACATTTTAATTTCTAAACTTTCTGCCATAGCAGCACATGAAAAGACCATGCTTACCAAATGTGAAGGACTATTGGCTTCCATGACAGCTATGCAGGTTAGAATAATTGTTCATTTTGTTCGACTTTCTAATCAATCATGGATGTATATAATACGCCCACCCACACTTCATTCCTCGAACCTTTTTTCCTTCATAAAACTCCAAAGCAAAAACTTTCATTTTCCACCCAAGCTCTTTTCTTCACCCATGGAAGCCAGCGCAGGCCTCGTTGCTGGCTCGCACAACCGAAACGAGCTCGTCGTCATTCACGGCCACGATGAGCCGAAGCCCTTGAGGAATTTGGACGGTCAGGTTTGCGAAATATGTGGAGATGAAGTGGGGATTACGGTGGACGGAGATCTGTTCGTCGCCTGTAACGAATGTGGCTTTCCTGTTTGTCGGCCGTGTTACGAGTATGAGAGAAGAGAAGGGAGCCAGCTCTGGAGTCCGAGAGTTCAAGGCGATGAAGACGAAGAGGATGTGGACGATATTGAGCATGAATTCAACATTGAGCATGAGAAGAACAAGCACAAACATCTTGCAGAAGCTATGCTTCATGGAAAGATGAGTTACGGAAGAGGTCCGGAAGAAGATGACAACCCTCAATTACATCAGGTGAGTGGTGAGCTCGCTATATCATCTCATGGCCATGGAGATCAAATGTTGTCATCTTCCCTGCATAAACGAGTGCATCCATATCCTGCTTCTGAACCTGGAAGTGAGCGATGGGACGAGAAGAAAGATGAAGGGTGGAAAGAGAGAACGGATGACTGGAAATTACAACAAGGCAATTTGGGGCCTGAGCCTGATGATGACCCTGACATGGCCATGATTGATGAAGCAAGACAGCCACTTTCAAGGAAAGTACCAATAGCGTCAAGCAAAGTAAATCCTTATCGGATGATCATTGTGGCTCGGCTTGTTATTCTCGCCTTCTTTCTTCGTTACAGGATTTTAAACCCTGTACATGATGCATTTGGACTCTGGTTAACTTCTGTGATATGCGAAATCTGGTTTGCTTTCTCATGGATTCTCGATCAGTTTCCTAAATGGTTTCCAATCGATCGCGAGACTTATCTCGATCGCCTTTCTCTCAGGTATGAACGAGAGGGCGAACCTAACATGCTTGCACCTGTAGATGTCTTTGTTAGTACTGTGGATCCATTGAAGGAACCTCCTCTTGTTACAGCTAATACAGTTCTTTCAATCTTAGCCATGGACTACCCAGTAGACAAAATTTCATGTTACATTTCTGATGATGGAGCTTCTATGCTCACCTTTGAAGCCATGTCATTAACAGCAGAATTTGCACGCAAATGGGTACCCTTCTGTAAAAAGTTTTCCATAGAACCTCGAGCCCCTGAAATGTATTTCTCGGAGAAGATGGATTACCTCAAAGATAAAGTCCAGCCTACATTTGTCAAAGAACGTCGAGCAATGAAGAGAGAGTATGAGGAATTCAAAGTTAGAACAAATGCTCTCGTGGCGAAAGCCATGAAAGTTCCTCCAGAAGGATGGATTATGCAAGATGGAATTCCATGGCCTGGAAATAACACCAAGGATCACCCTGGTATGATTCAAGTTTTTCTTGGTCATAGTGGAGGACTCGATGCCGAAGGAAATGAGCTTCCTCGCCTTGTTTATGTTTCTCGTGAAAAAAGGCCTGGTTTCCAACATCACAAGAAAGCTGGAGCCATGAACGCTTTAATTCGTGTCTCTGCAGTTCTTACAAATGCTTCTTTTATGCTGAATTTGGATTGTGATCATTACATAAACAACAGCAAGGCAGTGAGAGAAGCCATGTGTTTTCTAATGGATTCTACAATCGGAAAGAAAGTTTGTTATGTGCAGTTCCCACAACGATTCGACGGAATCGACAGGCATGATCGTTATGCCAATAGAAACACAGTCTTCTTTGATATTAATATGAAAGGTCTAGACGGAATTCAAGGTCCTGTATACGTGGGCACTGGATGTGTTTTCAGAAGGCAAGCTTTATATGGATATGAACCTCCAAAGAGGCCAAAGCGCCCAAAGATGATAAGTTGCGACTGTTGCCCGTGTTTCGGACGTCGCAAGAAGCTGAGCAAGTATTCTAAGCATACAGATGGAGATACAGCAGCAGGAATGGAAGATGACAAGGAATTATTGATGTCCCAAATGAACTTTGAGAAGAAATTTGGACAGTCAGCAATTTTTGTCACATCTACTTTAATGGAAGAAGGTGGTGTTCCTCCTTTCTCTAGTCCAGCATCACTGCTTAAAGAGGCAATCCATGTCATCAGTTGCGGCTATGAAGACAAAACAGAATGGGGTATTGAGCTTGGTTGGATTTATGGATCTATCACAGAGGATATCTTAACCGGGTTTAAGATGCATTGTCGCGGATGGAGATCAATATATTGCATGCCTAAAAGGGCTGCCTTTAAGGGAACTGCTCCAATCAACTTGTCTGATAGACTAAATCAGGTGCTGCGTTGGGCTCTTGGCTCCATTGAAATCTTCTTCAGTCGCCATTGTCCTGTTTGGTATGGCTATAAAGGAGGAAAGCTCAAGTGGCTTGAGAGATTTGCTTATGTTAATACAACTGTTTATCCCTTCACATCAATCCCTCTCCTTGCCTACTGCATCCTCCCTGCCATTTGCCTGCTCACGGATAAATTCATCATGCCTCCGATAAGCACATTTGCAAGCCTCTTCTTCATAGCTCTGTTCCTCTCCATCTTCGCAACGGGGATTCTCGAGCTTAGATGGAGCGGAGTGAGCATAGAAGAATGGTGGAGAAATGAGCAATTCTGGGTGATAGGTGGTGTCTCAGCTCATCTCTTTGCAGTCATTCAAGGCCTGCTAAAGGTTTTGGGTGGAATTGACACAAATTTCACTGTTACATCAAAAGCAGTCGACGATGAAGATTTCGGAGAATTATACACATTCAAATGGACAACTCTTTTGATTCCTCCAACAACAATCTTAATCATCAATCTTGTAGGAGTTGTAGCTGGTATTTCAGATGCTATAAACAATGGCTATCAATCCTGGGGGCCTCTATTTGGAAAACTTTTCTTTTCCTTCTGGGTAATTCTTCACCTCTACCCCTTCCTTAAAGGTCTAATGGGTCGGCAAAACCGGACTCCGACGATCGTCGTCATATGGTCAGTTCTCTTGGCTTCCATCTTCTCTTTGCTTTGGGTTAGGATTGATCCTTTTGTGATGAAAACTAAAGGCCCTGATGTGAAGCAGTGTGGAATTAATTGCTGA | 4908 | 43.95 | MDVYESALSRKHSAQVTTRLPLVPAEKNNAISTRRAPTREVSSRYKSPAPSTPSGPRRCVSPHTSRAVSATSPLVQKRAQSAERKRPSTPPSPPSPSTSVHDLSLDTLRRTSVGGRPESLWPSTMRSLSVSFQSDAISVPVSKKEKPVTTAPLDRTLRPSSNVAHKLGETPSAPRKPTPERKRSPVKGKIVPDESENSKPVDGVHSRLLAQHRWPRIGGKVSSNPLSRSVDLTDKPIRSLSTSLPGNGSYSLRRTASDSIGKSLQKSISNSSESVKVGCEIYSMDGSFLPVSGKLVSTRSGDRAAISSAVRSHFSSAPGSRLPSPNKTSVTPASVSRGVSPSRSRPSTPPRGISPSRIMSSSTSQSNNSTSVLTFIADVKKGKKGANHIEDAHQLKLLYNRCLQWRFANAQSESVLHIQEVTAEGALYNVCKSTLDLWDSVISKSINLQQLKLDIKLKSVLNDQLAHLEEWAVLERDHVGSLSGAVEDLEACTLRIPVTGGAKADVESLKGAICSAVDVMQAMGSSICSLLSRAEEMNILISKLSAIAAHEKTMLTKCEGLLASMTAMQVRIIVHFVRLSNQSWMYIIRPPTLHSSNLFSFIKLQSKNFHFPPKLFSSPMEASAGLVAGSHNRNELVVIHGHDEPKPLRNLDGQVCEICGDEVGITVDGDLFVACNECGFPVCRPCYEYERREGSQLWSPRVQGDEDEEDVDDIEHEFNIEHEKNKHKHLAEAMLHGKMSYGRGPEEDDNPQLHQVSGELAISSHGHGDQMLSSSLHKRVHPYPASEPGSERWDEKKDEGWKERTDDWKLQQGNLGPEPDDDPDMAMIDEARQPLSRKVPIASSKVNPYRMIIVARLVILAFFLRYRILNPVHDAFGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYISDDGASMLTFEAMSLTAEFARKWVPFCKKFSIEPRAPEMYFSEKMDYLKDKVQPTFVKERRAMKREYEEFKVRTNALVAKAMKVPPEGWIMQDGIPWPGNNTKDHPGMIQVFLGHSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNASFMLNLDCDHYINNSKAVREAMCFLMDSTIGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYEPPKRPKRPKMISCDCCPCFGRRKKLSKYSKHTDGDTAAGMEDDKELLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPFSSPASLLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSRHCPVWYGYKGGKLKWLERFAYVNTTVYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFIALFLSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLGGIDTNFTVTSKAVDDEDFGELYTFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDVKQCGINC | 1635 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 45847014 | 45864846 | + | Bma024032.1 | Bma06g00955 | 84457 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g00955 | 1635 | Pfam | QWRF family | 264 | 555 | IPR007573 | - | |
Bma06g00955 | 1635 | MobiDBLite | consensus disorder prediction | 1 | 106 | - | - | |
Bma06g00955 | 1635 | MobiDBLite | consensus disorder prediction | 780 | 823 | - | - | |
Bma06g00955 | 1635 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 943 | 1458 | IPR029044 | - | |
Bma06g00955 | 1635 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 639 | 716 | IPR013083 | - | |
Bma06g00955 | 1635 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 620 | 1635 | - | - | |
Bma06g00955 | 1635 | MobiDBLite | consensus disorder prediction | 139 | 202 | - | - | |
Bma06g00955 | 1635 | MobiDBLite | consensus disorder prediction | 311 | 367 | - | - | |
Bma06g00955 | 1635 | MobiDBLite | consensus disorder prediction | 175 | 201 | - | - | |
Bma06g00955 | 1635 | Pfam | Zinc-binding RING-finger | 646 | 711 | IPR027934 | - | |
Bma06g00955 | 1635 | SUPERFAMILY | RING/U-box | 640 | 716 | - | - | |
Bma06g00955 | 1635 | MobiDBLite | consensus disorder prediction | 64 | 78 | - | - | |
Bma06g00955 | 1635 | CDD | mRING-HC-C4C4_CesA_plant | 654 | 696 | - | - | |
Bma06g00955 | 1635 | MobiDBLite | consensus disorder prediction | 31 | 50 | - | - | |
Bma06g00955 | 1635 | Pfam | Cellulose synthase | 929 | 1629 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Bma06g00955 | 1635 | MobiDBLite | consensus disorder prediction | 784 | 809 | - | - | |
Bma06g00955 | 1635 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1066 | 1220 | IPR029044 | - | |
Bma06g00955 | 1635 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] | 620 | 1635 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01357 | Bma-Chr2:55985418 | Bma06g00955 | Bma-Chr6:45847014 | 6.45E-16 | dispersed | |
Bma06g00533 | Bma-Chr6:27321590 | Bma06g00955 | Bma-Chr6:45847014 | 0 | dispersed | |
Bma06g00955 | Bma-Chr6:45847014 | Bma10g01078 | Bma-Chr10:30875439 | 0 | dispersed | |
Bma07g01243 | Bma-Chr7:47417258 | Bma06g00955 | Bma-Chr6:45847014 | 3.08E-121 | dispersed | |
Bma12g00758 | Bma-Chr12:34540617 | Bma06g00955 | Bma-Chr6:45847014 | 1.24E-20 | dispersed | |
Bma12g01170 | Bma-Chr12:44518296 | Bma06g00955 | Bma-Chr6:45847014 | 4.62E-14 | dispersed | |
Bma14g00677 | Bma-Chr14:7319802 | Bma06g00955 | Bma-Chr6:45847014 | 9.91E-125 | dispersed | |
Bma04g00063 | Bma-Chr4:561763 | Bma06g00955 | Bma-Chr6:45847014 | 0 | transposed | |
Bma05g00054 | Bma-Chr5:2372409 | Bma06g00955 | Bma-Chr6:45847014 | 5.99E-51 | transposed | |
Bma05g00655 | Bma-Chr5:38435762 | Bma06g00955 | Bma-Chr6:45847014 | 2.95E-82 | transposed | |
Bma05g01323 | Bma-Chr5:52786012 | Bma06g00955 | Bma-Chr6:45847014 | 0 | transposed | |
Bma14g00986 | Bma-Chr14:11505694 | Bma06g00955 | Bma-Chr6:45847014 | 0 | transposed | |
Bma01g00334 | Bma-Chr1:2726640 | Bma06g00955 | Bma-Chr6:45847014 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g00955 | K10999 | - | csv:101214842 | 1913.27 |