Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g00979 | CTTGCTGGAGTTCTGATATTCTCTGCGATTCCGTTCACTGCTGTGAAAGCCATAGCTAATAGCCCCTTGGGAGAGTCGCTCCAGAGGCGAATGGAAGAGAGGAAGAAACTTGCGGTGGAGAACTCTTCCAAGTTCAAGGCCTTAGCCGAGAAGGCTAGGAAAGATAGCTTATGGTACGGAGAGGACCGTCCTCGATGGCTTGGCCCAATCCCATATCAATATCCAGAATATCTTAATGGTAAATTTCCAGGAGATTATGGATTTGATGTCGCAGGATTGGGCAAGGATTCTGAAGCCTTTCAAAAGTACTTCAATTTTGAAATACTGCATGCTCGCTGGGCTATGCTGGCTGCGCTTGGTGCACTGATTCCAGAGATATTAGACTTATTAGGAGCCTTTCACTTTGTTGAACCTGTTTGGTGGCGAGTTGGTTATTCAAAACTTAAGGGCGATACACTGGACTACCTCGGTATCCCTGGTCTCCACATAGCCGGTGGTCAAGGAGTGATTGTCATTGCAATTTGCCAAGCGATTTTGATGGTTGGACCAGAATATGCTAGATATTGTGGCATCGAGGCATTGGAACCGTTGGGAATCTATCTACCGGGTGATATAAATTATCCGGGAGGAGCCTTGTTTGATCCCTTAAACCTCTCCAAAGATCCGGTTGCTTTCGAGGAGCTGAAAGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTAGCCTGGTTAGGATTTTACATTCAAGCTGCTTTGACAGGTAAAGGTCCTATTCAAAACCTCATTGAGCACATTTCTGATCCTTTCCATAGTAATATACTTTCCTAG | 828 | 45.17 | LAGVLIFSAIPFTAVKAIANSPLGESLQRRMEERKKLAVENSSKFKALAEKARKDSLWYGEDRPRWLGPIPYQYPEYLNGKFPGDYGFDVAGLGKDSEAFQKYFNFEILHARWAMLAALGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGLHIAGGQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAALTGKGPIQNLIEHISDPFHSNILS | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 46356508 | 46358965 | + | Bma024066.1 | Bma06g00979 | 84481 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g00979 | 275 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC | 1 | 273 | - | - | |
Bma06g00979 | 275 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 273 | IPR001344 | GO:0009765|GO:0016020 | |
Bma06g00979 | 275 | SUPERFAMILY | Chlorophyll a-b binding protein | 57 | 274 | - | - | |
Bma06g00979 | 275 | Pfam | Chlorophyll A-B binding protein | 75 | 250 | IPR022796 | - | |
Bma06g00979 | 275 | Gene3D | Chlorophyll a/b binding protein domain | 65 | 275 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g00979 | Bma-Chr6:46356508 | Bma14g00298 | Bma-Chr14:3713353 | 3.85E-65 | dispersed | |
Bma06g00979 | Bma-Chr6:46356508 | Bma12g00859 | Bma-Chr12:39396188 | 1.52E-64 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g00979 | K14172 | - | mnt:21407512 | 518.464 |