Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00979 CTTGCTGGAGTTCTGATATTCTCTGCGATTCCGTTCACTGCTGTGAAAGCCATAGCTAATAGCCCCTTGGGAGAGTCGCTCCAGAGGCGAATGGAAGAGAGGAAGAAACTTGCGGTGGAGAACTCTTCCAAGTTCAAGGCCTTAGCCGAGAAGGCTAGGAAAGATAGCTTATGGTACGGAGAGGACCGTCCTCGATGGCTTGGCCCAATCCCATATCAATATCCAGAATATCTTAATGGTAAATTTCCAGGAGATTATGGATTTGATGTCGCAGGATTGGGCAAGGATTCTGAAGCCTTTCAAAAGTACTTCAATTTTGAAATACTGCATGCTCGCTGGGCTATGCTGGCTGCGCTTGGTGCACTGATTCCAGAGATATTAGACTTATTAGGAGCCTTTCACTTTGTTGAACCTGTTTGGTGGCGAGTTGGTTATTCAAAACTTAAGGGCGATACACTGGACTACCTCGGTATCCCTGGTCTCCACATAGCCGGTGGTCAAGGAGTGATTGTCATTGCAATTTGCCAAGCGATTTTGATGGTTGGACCAGAATATGCTAGATATTGTGGCATCGAGGCATTGGAACCGTTGGGAATCTATCTACCGGGTGATATAAATTATCCGGGAGGAGCCTTGTTTGATCCCTTAAACCTCTCCAAAGATCCGGTTGCTTTCGAGGAGCTGAAAGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTAGCCTGGTTAGGATTTTACATTCAAGCTGCTTTGACAGGTAAAGGTCCTATTCAAAACCTCATTGAGCACATTTCTGATCCTTTCCATAGTAATATACTTTCCTAG 828 45.17 LAGVLIFSAIPFTAVKAIANSPLGESLQRRMEERKKLAVENSSKFKALAEKARKDSLWYGEDRPRWLGPIPYQYPEYLNGKFPGDYGFDVAGLGKDSEAFQKYFNFEILHARWAMLAALGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGLHIAGGQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAALTGKGPIQNLIEHISDPFHSNILS 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46356508 46358965 + Bma024066.1 Bma06g00979 84481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00979 275 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 1 273 - -
Bma06g00979 275 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 273 IPR001344 GO:0009765|GO:0016020
Bma06g00979 275 SUPERFAMILY Chlorophyll a-b binding protein 57 274 - -
Bma06g00979 275 Pfam Chlorophyll A-B binding protein 75 250 IPR022796 -
Bma06g00979 275 Gene3D Chlorophyll a/b binding protein domain 65 275 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00979 Bma-Chr6:46356508 Bma14g00298 Bma-Chr14:3713353 3.85E-65 dispersed
Bma06g00979 Bma-Chr6:46356508 Bma12g00859 Bma-Chr12:39396188 1.52E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00979 K14172 - mnt:21407512 518.464